Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1153 Punica granatum HOM05D002549 ORTHO05D002755 3.8e-73 278.1 142 100.0
Gorai.009G018700 Gossypium raimondii HOM05D002549 ORTHO05D002755 1.6e-15 86.7 130 43.8
Gohir.A05G017400 Gossypium hirsutum HOM05D002549 ORTHO05D002755 6.1e-15 84.7 130 43.1
Gohir.D05G018300 Gossypium hirsutum HOM05D002549 ORTHO05D002755 6.1e-15 84.7 130 43.1
Duzib187G0701 Durio zibethinus HOM05D002549 ORTHO05D002755 1.8e-14 83.2 134 43.3
Duzib168G1278 Durio zibethinus HOM05D002549 ORTHO05D002755 5.7e-13 78.2 129 41.9
Sc18g0000680 Simmondsia chinensis HOM05D002549 ORTHO05D002755 2.8e-12 75.9 131 41.2
TAR625G1243 Trochodendron aralioides HOM05D002549 ORTHO05D002755 6.3e-12 74.7 115 43.5
MBI01_g37816_MAGBIO Magnolia biondii HOM05D002549 ORTHO05D002755 8.3e-12 74.3 116 41.4
TAR383G0202 Trochodendron aralioides HOM05D002549 ORTHO05D002755 1.6e-10 70.1 129 38.0
Potri.003G062200 Populus trichocarpa HOM05D002549 ORTHO05D002755 2.0e-10 69.7 132 36.4
Ah.14g080260 Amaranthus hybridus HOM05D002549 ORTHO05D002755 2.7e-10 69.3 120 42.5
CiPaw.03G242300 Carya illinoinensis HOM05D002549 ORTHO05D002755 3.5e-10 68.9 132 37.9
Hma1.2p1_0515F.1_g170200 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 4.5e-10 68.6 115 40.0
Eucgr.C04182 Eucalyptus grandis HOM05D002549 ORTHO05D002755 5.9e-10 68.2 117 41.0
Phvul.005G175700 Phaseolus vulgaris HOM05D002549 ORTHO05D002755 5.9e-10 68.2 135 34.8
COL.COLO4_05774 Corchorus olitorius HOM05D002549 ORTHO05D002755 7.8e-10 67.8 129 37.2
Eucgr.C01136 Eucalyptus grandis HOM05D002549 ORTHO05D002755 7.8e-10 67.8 136 41.9
arahy.Tifrunner.gnm1.ann1.62RLPM Arachis hypogaea HOM05D002549 ORTHO05D002755 1.0e-09 67.4 126 38.9
arahy.Tifrunner.gnm1.ann1.CZ6M1X Arachis hypogaea HOM05D002549 ORTHO05D002755 1.0e-09 67.4 126 41.3
Cfa003350 Carpinus fangiana HOM05D002549 ORTHO05D002755 1.3e-09 67.0 130 36.9
Haze_25611 Corylus avellana HOM05D002549 ORTHO05D002755 1.3e-09 67.0 129 36.4
MSTRG.11120 Avicennia marina HOM05D002549 ORTHO05D002755 2.3e-09 66.2 121 39.7
EL10Ac8g18620 Beta vulgaris HOM05D002549 ORTHO05D002755 2.3e-09 66.2 117 37.6
Actinidia26401 Actinidia chinensis HOM05D002549 ORTHO05D002755 2.9e-09 65.9 129 36.4
VMungo1080G1223 Vigna mungo HOM05D002549 ORTHO05D002755 2.9e-09 65.9 135 35.6
Manes.04G115900 Manihot esculenta HOM05D002549 ORTHO05D002755 3.8e-09 65.5 130 37.7
Actinidia07432 Actinidia chinensis HOM05D002549 ORTHO05D002755 5.0e-09 65.1 137 36.5
Sed0007083 Sechium edule HOM05D002549 ORTHO05D002755 5.0e-09 65.1 139 38.1
Nn8g39394 Nelumbo nucifera HOM05D002549 ORTHO05D002755 6.6e-09 64.7 129 34.9
QL02p087849 Quercus lobata HOM05D002549 ORTHO05D002755 6.6e-09 64.7 130 36.9
CSS0001526 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 8.6e-09 64.3 130 35.4
CSS0031007 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 8.6e-09 64.3 130 35.4
Lalb_Chr07g0178831 Lupinus albus HOM05D002549 ORTHO05D002755 8.6e-09 64.3 140 37.1
Migut.I00796 Erythranthe guttata HOM05D002549 ORTHO05D002755 1.5e-08 63.5 116 38.8
ClCG06G010950 Citrullus lanatus HOM05D002549 ORTHO05D002755 1.9e-08 63.2 136 40.4
Ciclev10009953m.g Citrus clementina HOM05D002549 ORTHO05D002755 1.9e-08 63.2 130 33.8
Gohir.D07G038900 Gossypium hirsutum HOM05D002549 ORTHO05D002755 2.5e-08 62.8 133 36.1
Hma1.2p1_0018F.1_g012630 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 2.5e-08 62.8 122 39.3
PSO170G1992 Papaver somniferum HOM05D002549 ORTHO05D002755 2.5e-08 62.8 120 41.7
Sabra01G0139600 Salix brachista HOM05D002549 ORTHO05D002755 2.5e-08 62.8 128 32.8
CSS0010325 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 3.3e-08 62.4 131 35.1
CSS0036416 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 3.3e-08 62.4 131 35.1
Glyma.13G364000 Glycine max HOM05D002549 ORTHO05D002755 3.3e-08 62.4 116 37.1
Manes.11G053601 Manihot esculenta HOM05D002549 ORTHO05D002755 3.3e-08 62.4 121 34.7
PSO455G0279 Papaver somniferum HOM05D002549 ORTHO05D002755 3.3e-08 62.4 149 36.9
Haze_16521 Corylus avellana HOM05D002549 ORTHO05D002755 4.3e-08 62.0 117 35.9
Gohir.A06G057200 Gossypium hirsutum HOM05D002549 ORTHO05D002755 4.3e-08 62.0 137 35.0
Lalb_Chr13g0301951 Lupinus albus HOM05D002549 ORTHO05D002755 4.3e-08 62.0 140 38.6
Peaxi162Scf00274g00827 Petunia axillaris HOM05D002549 ORTHO05D002755 4.3e-08 62.0 118 39.8
CsaV3_1G029830 Cucumis sativus L. HOM05D002549 ORTHO05D002755 5.6e-08 61.6 136 37.5
Gohir.D06G055500 Gossypium hirsutum HOM05D002549 ORTHO05D002755 5.6e-08 61.6 141 34.8
Medtr4g011060 Medicago truncatula HOM05D002549 ORTHO05D002755 5.6e-08 61.6 140 37.9
Potri.001G172100 Populus trichocarpa HOM05D002549 ORTHO05D002755 5.6e-08 61.6 115 36.5
Gohir.A07G034900 Gossypium hirsutum HOM05D002549 ORTHO05D002755 7.3e-08 61.2 131 35.9
Gorai.010G064800 Gossypium raimondii HOM05D002549 ORTHO05D002755 7.3e-08 61.2 118 36.4
Solyc03g116490.1 Solanum lycopersicum HOM05D002549 ORTHO05D002755 1.2e-07 60.5 136 36.0
Aa31LG7G160 Aethionema arabicum HOM05D002549 ORTHO05D002755 1.6e-07 60.1 144 36.1
MD02G1035000 Malus domestica HOM05D002549 ORTHO05D002755 1.6e-07 60.1 141 35.5
Sopen03g035380 Solanum pennellii HOM05D002549 ORTHO05D002755 1.6e-07 60.1 136 36.0
SGA_v2.0_scaffold5G02666 Striga asiatica HOM05D002549 ORTHO05D002755 1.6e-07 60.1 123 37.4
CSS0019510 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 2.1e-07 59.7 132 36.4
CSS0040923 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 2.1e-07 59.7 132 36.4
Eucgr.J03053 Eucalyptus grandis HOM05D002549 ORTHO05D002755 2.1e-07 59.7 138 34.8
Gorai.001G041000 Gossypium raimondii HOM05D002549 ORTHO05D002755 2.1e-07 59.7 133 35.3
Thecc.06G070600 Theobroma cacao HOM05D002549 ORTHO05D002755 2.1e-07 59.7 144 34.0
Glyma.08G210800 Glycine max HOM05D002549 ORTHO05D002755 2.8e-07 59.3 116 37.9
Glyma.17G116100 Glycine max HOM05D002549 ORTHO05D002755 2.8e-07 59.3 129 37.2
TPR.G8449 Trifolium pratense HOM05D002549 ORTHO05D002755 2.8e-07 59.3 128 33.6
Manes.14G130728 Manihot esculenta HOM05D002549 ORTHO05D002755 3.6e-07 58.9 120 38.3
Medtr4g114050 Medicago truncatula HOM05D002549 ORTHO05D002755 3.6e-07 58.9 137 34.3
Psat5g301360 Pisum sativum HOM05D002549 ORTHO05D002755 3.6e-07 58.9 135 34.8
Prupe.7G240000 Prunus persica HOM05D002549 ORTHO05D002755 3.6e-07 58.9 140 36.4
PGR102G2540 Punica granatum HOM05D002549 ORTHO05D002755 3.6e-07 58.9 135 33.3
QL05p027977 Quercus lobata HOM05D002549 ORTHO05D002755 3.6e-07 58.9 140 35.7
ATR1156G028 Amborella trichopoda HOM05D002549 ORTHO05D002755 4.7e-07 58.5 116 37.9
Lj3g0000921 Lotus japonicus HOM05D002549 ORTHO05D002755 4.7e-07 58.5 136 36.8
Peaxi162Scf00641g00003 Petunia axillaris HOM05D002549 ORTHO05D002755 4.7e-07 58.5 134 33.6
CAN.G407.104 Capsicum annuum HOM05D002549 ORTHO05D002755 6.1e-07 58.2 136 36.0
Duzib150G0928 Durio zibethinus HOM05D002549 ORTHO05D002755 6.1e-07 58.2 134 32.8
Sed0003846 Sechium edule HOM05D002549 ORTHO05D002755 6.1e-07 58.2 129 32.6
Aqoxy7G02107 Aquilegia oxysepala HOM05D002549 ORTHO05D002755 8.0e-07 57.8 133 33.1
CAN.G377.7 Capsicum annuum HOM05D002549 ORTHO05D002755 8.0e-07 57.8 127 35.4
AUR62011092 Chenopodium quinoa HOM05D002549 ORTHO05D002755 8.0e-07 57.8 137 35.8
DCAR_017826 Daucus carota HOM05D002549 ORTHO05D002755 8.0e-07 57.8 139 33.8
Oeu063538.1 Olea europaea HOM05D002549 ORTHO05D002755 8.0e-07 57.8 130 37.7
Phvul.003G163200 Phaseolus vulgaris HOM05D002549 ORTHO05D002755 8.0e-07 57.8 135 32.6
Thecc.09G123500 Theobroma cacao HOM05D002549 ORTHO05D002755 8.0e-07 57.8 134 34.3
Aa31sc453G10 Aethionema arabicum HOM05D002549 ORTHO05D002755 1.0e-06 57.4 131 33.6
Lalb_Chr25g0279471 Lupinus albus HOM05D002549 ORTHO05D002755 1.4e-06 57.0 136 33.8
TAR626G1731 Trochodendron aralioides HOM05D002549 ORTHO05D002755 1.4e-06 57.0 118 38.1
Ciclev10010562m.g Citrus clementina HOM05D002549 ORTHO05D002755 1.8e-06 56.6 111 36.9
Dinv30577 Davidia involucrata HOM05D002549 ORTHO05D002755 1.8e-06 56.6 115 34.8
Dinv38101 Davidia involucrata HOM05D002549 ORTHO05D002755 1.8e-06 56.6 119 35.3
Nn2g11971 Nelumbo nucifera HOM05D002549 ORTHO05D002755 1.8e-06 56.6 125 34.4
Oeu015240.1 Olea europaea HOM05D002549 ORTHO05D002755 1.8e-06 56.6 128 32.8
Psat7g255880 Pisum sativum HOM05D002549 ORTHO05D002755 1.8e-06 56.6 140 32.1
VMungo1215G2005 Vigna mungo HOM05D002549 ORTHO05D002755 1.8e-06 56.6 127 34.6
Gohir.A10G075800 Gossypium hirsutum HOM05D002549 ORTHO05D002755 2.3e-06 56.2 139 31.7
Hma1.2p1_0665F.1_g199110 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 2.3e-06 56.2 128 33.6
Nitab4.5_0002257g0060 Nicotiana tabacum HOM05D002549 ORTHO05D002755 2.3e-06 56.2 121 33.1
Peaxi162Scf00984g00014 Petunia axillaris HOM05D002549 ORTHO05D002755 2.3e-06 56.2 121 33.9
Sed0016403 Sechium edule HOM05D002549 ORTHO05D002755 2.3e-06 56.2 142 35.2
A03p09820 Brassica napus HOM05D002549 ORTHO05D002755 3.0e-06 55.8 115 34.8
BraA03t10297Z Brassica rapa HOM05D002549 ORTHO05D002755 3.0e-06 55.8 115 34.8
Dinv41529 Davidia involucrata HOM05D002549 ORTHO05D002755 3.0e-06 55.8 131 33.6
Duzib235G0326 Durio zibethinus HOM05D002549 ORTHO05D002755 3.0e-06 55.8 141 30.5
Glyma.15G009900 Glycine max HOM05D002549 ORTHO05D002755 3.0e-06 55.8 116 32.8
Hma1.2p1_0007F.1_g005060 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 3.0e-06 55.8 117 33.3
Lsat_1_v5_gn_5_132361 Lactuca sativa HOM05D002549 ORTHO05D002755 3.0e-06 55.8 134 35.1
Medtr2g103380 Medicago truncatula HOM05D002549 ORTHO05D002755 3.0e-06 55.8 129 33.3
PGSC0003DMG400000607 Solanum tuberosum HOM05D002549 ORTHO05D002755 3.0e-06 55.8 135 34.1
BcaC05g25481 Brassica carinata HOM05D002549 ORTHO05D002755 4.0e-06 55.5 142 35.2
ClCG07G012770 Citrullus lanatus HOM05D002549 ORTHO05D002755 4.0e-06 55.5 136 36.0
DCAR_003096 Daucus carota HOM05D017135 ORTHO05D013817 4.0e-06 55.5 108 36.1
Thhalv10015056m.g Eutrema salsugineum HOM05D002549 ORTHO05D002755 4.0e-06 55.5 139 33.1
BcaB01g04804 Brassica carinata HOM05D002549 ORTHO05D002755 5.2e-06 55.1 115 37.4
BcaB01g04807 Brassica carinata HOM05D002549 ORTHO05D002755 5.2e-06 55.1 115 37.4
C03p11400 Brassica napus HOM05D002549 ORTHO05D002755 5.2e-06 55.1 115 37.4
BolC3t13614H Brassica oleracea HOM05D002549 ORTHO05D002755 5.2e-06 55.1 115 37.4
Carub.0006s1848 Capsella rubella HOM05D002549 ORTHO05D002755 5.2e-06 55.1 121 34.7
Thhalv10009053m.g Eutrema salsugineum HOM05D002549 ORTHO05D002755 5.2e-06 55.1 147 35.4
Gorai.011G081600 Gossypium raimondii HOM05D002549 ORTHO05D002755 5.2e-06 55.1 132 30.3
BcaB01g04808 Brassica carinata HOM05D002549 ORTHO05D002755 6.8e-06 54.7 116 34.5
AUR62033481 Chenopodium quinoa HOM05D002549 ORTHO05D002755 6.8e-06 54.7 117 37.6
Cc04_g04130 Coffea canephora HOM05D002549 ORTHO05D002755 6.8e-06 54.7 142 38.0
Gohir.D10G075600 Gossypium hirsutum HOM05D002549 ORTHO05D002755 6.8e-06 54.7 139 31.7
THA.LOC104812501 Tarenaya hassleriana HOM05D002549 ORTHO05D002755 6.8e-06 54.7 152 32.2
Glyma.07G031900 Glycine max HOM05D002549 ORTHO05D002755 8.9e-06 54.3 121 37.2
Glyma.13G168400 Glycine max HOM05D002549 ORTHO05D002755 8.9e-06 54.3 129 35.7
RcHm_v2.0_Chr2g0089091 Rosa chinensis HOM05D002549 ORTHO05D002755 8.9e-06 54.3 129 33.3
Sopen12g002570 Solanum pennellii HOM05D002549 ORTHO05D002755 8.9e-06 54.3 132 35.6
SGA_v2.0_scaffold37G14785 Striga asiatica HOM05D002549 ORTHO05D002755 8.9e-06 54.3 132 35.6
unitig_899.g14782 Utricularia gibba HOM05D002549 ORTHO05D002755 8.9e-06 54.3 128 34.4


User provided reference genes

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