Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 6.0e-33 143.7 77 100.0
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 1.6e-30 135.6 77 90.9
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 1.1e-29 132.9 74 93.2
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 1.1e-29 132.9 79 91.1
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 1.4e-29 132.5 77 89.6
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 1.4e-29 132.5 77 89.6
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.8e-29 132.1 77 89.6
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 1.8e-29 132.1 77 89.6
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 1.8e-29 132.1 77 93.5
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 1.8e-29 132.1 76 90.8
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 2.4e-29 131.7 77 83.1
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 2.4e-29 131.7 74 94.6
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 2.4e-29 131.7 77 89.6
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 3.1e-29 131.3 77 83.1
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 5.3e-29 130.6 77 87.0
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 5.3e-29 130.6 77 87.0
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 5.3e-29 130.6 77 87.0
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 5.3e-29 130.6 77 87.0
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 5.3e-29 130.6 76 89.5
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 9.0e-29 129.8 74 90.5
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 9.0e-29 129.8 76 82.9
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 9.0e-29 129.8 77 92.2
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 1.2e-28 129.4 77 87.0
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 1.2e-28 129.4 77 87.0
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.5e-28 129.0 77 87.0
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 1.5e-28 129.0 77 85.7
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 1.5e-28 129.0 77 87.0
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 2.0e-28 128.6 76 88.2
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 3.4e-28 127.9 79 87.3
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 3.4e-28 127.9 74 90.5
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 4.5e-28 127.5 79 87.3
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 5.8e-28 127.1 79 87.3
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 5.8e-28 127.1 79 87.3
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 5.8e-28 127.1 79 87.3
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 5.8e-28 127.1 79 87.3
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 7.6e-28 126.7 79 87.3
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 7.6e-28 126.7 77 85.7
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 7.6e-28 126.7 77 87.0
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 7.6e-28 126.7 76 88.2
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 7.6e-28 126.7 74 87.8
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 1.7e-27 125.6 77 85.7
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.7e-27 125.6 79 86.1
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 2.2e-27 125.2 77 84.4
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 2.2e-27 125.2 77 84.4
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 3.8e-27 124.4 76 86.8
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 3.8e-27 124.4 74 89.2
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 4.9e-27 124.0 74 83.8
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 6.5e-27 123.6 79 84.8
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 8.4e-27 123.2 74 87.8
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 8.4e-27 123.2 74 87.8
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 8.4e-27 123.2 74 87.8
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 1.1e-26 122.9 76 82.9
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 1.1e-26 122.9 76 82.9
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 1.1e-26 122.9 74 87.8
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 1.1e-26 122.9 77 80.5
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 3.2e-26 121.3 79 83.5
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 3.2e-26 121.3 77 84.4
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 4.2e-26 120.9 72 86.1
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 7.1e-26 120.2 76 84.2
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 7.1e-26 120.2 76 78.9
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 7.1e-26 120.2 76 82.9
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 9.3e-26 119.8 77 81.8
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 9.3e-26 119.8 77 81.8
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 9.3e-26 119.8 77 80.5
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 1.2e-25 119.4 77 85.7
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 1.2e-25 119.4 74 83.8
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.6e-25 119.0 74 83.8
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 2.7e-25 118.2 76 82.9
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.7e-25 118.2 74 85.1
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 7.9e-25 116.7 77 83.1
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 1.0e-24 116.3 77 83.1
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 1.0e-24 116.3 77 83.1
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 1.0e-24 116.3 77 77.9
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 1.0e-24 116.3 76 80.3
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 1.3e-24 115.9 76 80.3
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 1.3e-24 115.9 77 83.1
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 1.3e-24 115.9 72 81.9
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 1.8e-24 115.5 79 74.7
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 1.8e-24 115.5 77 83.1
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 1.8e-24 115.5 74 77.0
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 1.8e-24 115.5 77 80.5
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 2.3e-24 115.2 77 81.8
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 2.3e-24 115.2 77 76.6
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 3.0e-24 114.8 77 81.8
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 3.0e-24 114.8 74 77.0
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 5.1e-24 114.0 77 81.8
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 5.1e-24 114.0 72 80.6
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 6.7e-24 113.6 79 78.5
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 6.7e-24 113.6 74 78.4
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 6.7e-24 113.6 77 80.5
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 1.1e-23 112.8 74 78.4
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 1.5e-23 112.5 77 76.6
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.9e-23 112.1 74 79.7
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.9e-23 112.1 73 82.2
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 2.5e-23 111.7 76 80.3
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 2.5e-23 111.7 77 74.0
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 3.3e-23 111.3 77 72.7
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 4.3e-23 110.9 74 78.4
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 5.7e-23 110.5 76 73.7
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 7.4e-23 110.2 77 76.6
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 1.3e-22 109.4 77 75.3
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 3.7e-22 107.8 74 78.4
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 3.7e-22 107.8 74 77.0
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 4.8e-22 107.5 77 77.9
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 4.8e-22 107.5 77 77.9
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 6.3e-22 107.1 74 79.7
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.4e-21 105.9 63 82.5
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 1.8e-21 105.5 74 78.4
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.8e-21 105.5 63 90.5
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 3.1e-21 104.8 77 74.0
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 3.1e-21 104.8 65 84.6
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 4.1e-21 104.4 61 83.6
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 4.5e-20 100.9 64 81.2
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 7.6e-20 100.1 98 63.3
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 1.7e-19 99.0 62 83.9
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 2.2e-19 98.6 63 85.7
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 2.2e-19 98.6 102 60.8
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.9e-18 95.5 58 82.8
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 3.2e-18 94.7 73 67.1
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 5.5e-18 94.0 63 84.1
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 1.2e-17 92.8 99 60.6
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 1.6e-17 92.4 56 91.1
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 1.6e-17 92.4 73 67.1
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 3.9e-16 87.8 72 61.1
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.9e-15 85.5 69 66.7
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 9.7e-15 83.2 63 77.8
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 4.1e-13 77.8 47 89.4
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 1.1e-10 69.7 96 53.1
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 3.2e-10 68.2 46 78.3
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 5.5e-10 67.4 37 94.6
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 2.7e-09 65.1 47 72.3
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 6.1e-09 63.9 34 85.3
Sed0013060 Sechium edule HOM05D000140 ORTHO05D000087 1.8e-08 62.4 35 77.1
Pp3c7_2400 Physcomitrium patens HOM05D006545 ORTHO05D007985 8.8e-08 60.1 128 35.2
Actinidia25251 Actinidia chinensis HOM05D006545 ORTHO05D007985 4.4e-07 57.8 46 76.1


User provided reference genes

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