Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 6.0e-68 260.8 137 100.0
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 7.9e-52 207.2 138 79.0
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 4.8e-49 198.0 136 74.3
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 6.3e-49 197.6 135 74.1
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 1.1e-48 196.8 132 77.3
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 1.1e-48 196.8 132 77.3
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 6.9e-48 194.1 134 72.4
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.2e-47 193.4 135 74.8
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 1.5e-47 193.0 133 75.2
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 1.5e-47 193.0 135 73.3
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 3.4e-47 191.8 134 70.9
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 5.9e-47 191.0 134 73.1
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 7.7e-47 190.7 137 71.5
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 7.7e-47 190.7 137 71.5
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.7e-46 189.5 134 72.4
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.7e-46 189.5 134 72.4
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.7e-46 189.5 136 72.8
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.9e-46 188.7 134 72.4
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.9e-46 188.7 134 71.6
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.9e-46 188.7 135 72.6
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 8.5e-46 187.2 137 70.1
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 1.1e-45 186.8 134 70.1
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 1.1e-45 186.8 134 72.4
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 2.5e-45 185.7 135 68.9
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 3.2e-45 185.3 136 69.9
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 4.2e-45 184.9 133 70.7
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 5.5e-45 184.5 136 67.6
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 5.5e-45 184.5 134 69.4
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 7.2e-45 184.1 136 69.9
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 9.4e-45 183.7 124 78.2
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 1.6e-44 183.0 141 68.1
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 2.1e-44 182.6 136 66.9
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 2.7e-44 182.2 133 67.7
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 2.7e-44 182.2 133 67.7
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 3.6e-44 181.8 142 68.3
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 3.6e-44 181.8 135 66.7
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 3.6e-44 181.8 135 66.7
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 7.9e-44 180.6 134 69.4
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 1.0e-43 180.3 138 67.4
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 1.4e-43 179.9 137 67.2
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.8e-43 179.5 126 73.0
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 1.8e-43 179.5 123 74.8
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.3e-43 179.1 136 66.9
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.3e-43 179.1 136 66.9
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 3.0e-43 178.7 137 67.2
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 3.0e-43 178.7 134 69.4
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 3.9e-43 178.3 138 64.5
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 6.7e-43 177.6 140 68.6
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 8.8e-43 177.2 134 67.9
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.1e-42 176.8 123 74.0
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 1.1e-42 176.8 141 66.7
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 2.5e-42 175.6 136 66.2
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 2.5e-42 175.6 137 66.4
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.3e-42 175.3 137 70.8
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 4.3e-42 174.9 137 66.4
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 7.4e-42 174.1 130 68.5
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 9.7e-42 173.7 137 64.2
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 9.7e-42 173.7 129 69.8
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 9.7e-42 173.7 136 63.2
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 9.7e-42 173.7 131 69.5
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 3.7e-41 171.8 130 66.9
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 4.8e-41 171.4 137 68.6
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 6.3e-41 171.0 129 69.0
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 8.2e-41 170.6 132 65.9
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 8.2e-41 170.6 127 72.4
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 2.4e-40 169.1 118 75.4
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 4.1e-40 168.3 137 69.3
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 4.1e-40 168.3 137 67.2
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 5.3e-40 167.9 138 66.7
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 6.9e-40 167.5 122 69.7
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 9.1e-40 167.2 132 63.6
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 2.2e-38 162.5 127 65.4
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 2.9e-38 162.2 117 71.8
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 6.5e-38 161.0 116 69.8
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 6.5e-38 161.0 134 63.4
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 1.1e-37 160.2 122 66.4
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.9e-37 159.5 118 68.6
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 1.9e-37 159.5 119 68.1
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 3.2e-37 158.7 117 70.9
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 5.5e-37 157.9 135 61.5
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 1.2e-36 156.8 136 62.5
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 1.6e-36 156.4 131 64.1
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 3.6e-36 155.2 127 59.8
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 7.9e-36 154.1 134 61.2
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 7.4e-34 147.5 127 64.6
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 3.7e-33 145.2 130 59.2
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 4.8e-33 144.8 132 60.6
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 6.3e-33 144.4 130 61.5
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 9.1e-32 140.6 123 60.2
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.5e-31 139.8 130 57.7
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.0e-31 139.4 111 62.2
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 2.2e-30 136.0 133 55.6
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 3.8e-30 135.2 103 67.0
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 5.0e-30 134.8 96 77.1
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.4e-27 126.7 127 55.1
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 1.7e-25 119.8 117 58.1
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 8.2e-25 117.5 126 52.4
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 3.8e-22 108.6 128 47.7
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 4.7e-20 101.7 130 45.4
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 3.0e-19 99.0 127 46.5
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 3.7e-09 65.5 51 68.6
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.4e-08 62.8 70 51.4


User provided reference genes

Program Settings