Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 7.2e-103 377.5 222 100.0
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 8.8e-69 264.2 222 65.3
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 1.5e-68 263.5 221 69.7
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 5.7e-68 261.5 222 64.9
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.8e-67 258.5 222 64.0
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.8e-67 258.5 222 64.0
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 4.8e-67 258.5 226 64.6
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 7.0e-66 254.6 222 64.0
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 9.1e-66 254.2 223 63.7
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.2e-65 253.8 222 63.5
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.5e-65 252.3 222 63.5
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 3.5e-65 252.3 236 62.3
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 4.5e-65 251.9 224 64.7
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 7.7e-65 251.1 223 62.3
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.7e-64 250.0 222 63.1
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 3.8e-64 248.8 222 63.1
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 5.0e-64 248.4 222 63.5
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 5.0e-64 248.4 228 62.3
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 3.2e-63 245.7 233 60.5
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 4.2e-63 245.4 224 66.5
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 5.5e-63 245.0 230 60.4
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 7.2e-63 244.6 222 61.7
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 7.2e-63 244.6 222 60.8
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 9.5e-63 244.2 222 62.6
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 9.5e-63 244.2 222 60.4
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 9.5e-63 244.2 222 61.7
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 1.2e-62 243.8 225 59.6
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 2.1e-62 243.0 225 60.4
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 2.1e-62 243.0 222 61.3
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 2.1e-62 243.0 228 59.6
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 3.6e-62 242.3 222 59.9
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 4.7e-62 241.9 221 61.1
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 4.7e-62 241.9 222 62.6
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 6.1e-62 241.5 131 91.6
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.0e-61 240.7 222 59.5
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 1.8e-61 240.0 131 90.8
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 1.8e-61 240.0 131 90.8
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 1.8e-61 240.0 131 91.6
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 1.8e-61 240.0 131 90.1
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 3.0e-61 239.2 131 90.1
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 3.0e-61 239.2 238 58.0
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.0e-61 238.8 222 60.8
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 4.0e-61 238.8 228 60.5
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 5.2e-61 238.4 131 90.1
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 8.8e-61 237.7 225 59.6
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 1.2e-60 237.3 131 89.3
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.2e-60 237.3 225 59.6
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 2.0e-60 236.5 131 87.8
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 2.6e-60 236.1 222 60.4
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 3.4e-60 235.7 222 60.4
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 5.7e-60 235.0 272 52.6
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 5.7e-60 235.0 243 63.4
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 5.7e-60 235.0 131 89.3
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 7.5e-60 234.6 131 87.8
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 7.5e-60 234.6 223 60.5
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 9.8e-60 234.2 226 59.7
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 1.3e-59 233.8 224 60.3
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 1.7e-59 233.4 131 87.8
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.7e-59 232.3 223 57.8
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 4.9e-59 231.9 131 88.5
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 4.9e-59 231.9 131 87.8
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 8.3e-59 231.1 130 89.2
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 8.3e-59 231.1 222 58.1
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.4e-58 229.6 244 55.7
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 9.2e-58 227.6 131 86.3
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 1.6e-57 226.9 227 59.5
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 2.7e-57 226.1 218 58.3
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 5.9e-57 224.9 204 63.2
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 5.9e-57 224.9 245 55.1
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 5.9e-57 224.9 227 58.1
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.3e-56 223.8 227 57.7
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 1.7e-56 223.4 132 87.9
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 8.6e-56 221.1 263 53.6
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 1.5e-55 220.3 227 57.7
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 2.5e-55 219.5 227 57.7
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 2.5e-55 219.5 227 57.7
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 3.3e-55 219.2 222 56.8
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 5.6e-55 218.4 222 57.7
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 7.3e-55 218.0 227 57.3
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 7.3e-55 218.0 214 57.5
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 9.5e-55 217.6 222 57.2
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.2e-54 217.2 131 85.5
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 1.6e-54 216.9 222 57.7
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 1.6e-54 216.9 229 57.2
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 2.1e-54 216.5 131 83.2
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 3.6e-54 215.7 131 83.2
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 4.7e-54 215.3 131 81.7
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 6.1e-54 214.9 130 82.3
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 6.1e-54 214.9 130 82.3
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 6.1e-54 214.9 129 83.7
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 6.1e-54 214.9 130 80.0
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 8.0e-54 214.5 213 60.6
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.0e-53 214.2 129 82.9
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 1.0e-53 214.2 131 81.7
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.8e-53 213.4 220 55.5
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 2.3e-53 213.0 131 81.7
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 4.0e-53 212.2 247 53.4
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 3.4e-52 209.1 120 85.0
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 4.4e-52 208.8 131 76.3
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 4.4e-52 208.8 131 77.9
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 7.5e-52 208.0 315 43.5
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 9.8e-52 207.6 131 78.6
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 1.7e-51 206.8 131 77.1
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 2.2e-51 206.5 203 63.5
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 2.9e-51 206.1 204 57.4
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 1.8e-50 203.4 206 57.8
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 2.4e-50 203.0 131 80.9
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 2.4e-50 203.0 112 89.3
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 7.0e-50 201.4 225 54.2
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.2e-49 200.7 130 76.2
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 3.5e-49 199.1 130 76.2
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 4.6e-49 198.7 202 56.9
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.3e-48 197.2 145 73.1
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 3.0e-48 196.1 124 77.4
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 8.6e-48 194.5 131 68.7
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 2.8e-46 189.5 131 67.2
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 1.4e-45 187.2 209 54.1
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 6.8e-45 184.9 209 53.1
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 6.8e-45 184.9 105 87.6
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 1.2e-44 184.1 124 72.6
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 3.4e-44 182.6 222 50.9
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 2.2e-43 179.9 112 80.4
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 3.7e-43 179.1 178 58.4
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 3.2e-42 176.0 189 53.4
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 1.6e-41 173.7 130 66.9
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 2.0e-41 173.3 131 69.5
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 6.0e-41 171.8 118 72.0
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 1.7e-40 170.2 181 55.8
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 2.3e-40 169.9 116 74.1
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 3.0e-40 169.5 134 66.4
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.5e-39 167.2 131 64.1
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 9.5e-39 164.5 199 49.7
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 1.2e-38 164.1 103 81.6
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 2.1e-38 163.3 194 50.5
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 8.1e-38 161.4 175 53.1
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 1.1e-37 161.0 131 67.2
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 1.4e-37 160.6 130 63.1
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 3.1e-37 159.5 134 62.7
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 2.6e-36 156.4 131 58.0
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.1e-34 151.0 82 90.2
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.9e-34 150.2 84 88.1
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.4e-34 149.8 173 52.0
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 3.5e-33 146.0 200 46.5
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.9e-26 123.6 134 50.7
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 1.2e-25 120.9 132 47.0
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 4.7e-22 109.0 62 90.3
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 1.3e-16 90.9 130 40.0
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 1.3e-16 90.9 88 54.5
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 7.3e-15 85.1 116 37.9
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 5.3e-13 79.0 56 75.0
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 8.4e-11 71.6 49 69.4
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.1e-07 61.2 35 85.7
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 1.5e-07 60.8 39 69.2


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