Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 2.4e-124 449.1 279 100.0
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 7.3e-12 75.5 152 36.8
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 1.6e-11 74.3 78 48.7
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 1.6e-11 74.3 145 37.2
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 2.1e-11 73.9 73 57.5
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 4.7e-11 72.8 72 51.4
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 4.7e-11 72.8 87 44.8
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 1.4e-10 71.2 76 51.3
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 1.4e-10 71.2 79 49.4
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 1.8e-10 70.9 157 35.0
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 2.4e-10 70.5 70 45.7
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 3.1e-10 70.1 157 33.1
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 3.1e-10 70.1 66 57.6
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 4.0e-10 69.7 191 33.0
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 4.0e-10 69.7 198 32.8
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 5.2e-10 69.3 177 34.5
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 6.8e-10 68.9 322 28.3
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 6.8e-10 68.9 79 45.6
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 8.9e-10 68.6 113 45.1
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 8.9e-10 68.6 303 34.3
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 8.9e-10 68.6 145 35.9
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 1.2e-09 68.2 198 33.3
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 1.2e-09 68.2 87 44.8
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 2.0e-09 67.4 84 46.4
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 5.8e-09 65.9 79 46.8
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 7.6e-09 65.5 107 40.2
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 9.9e-09 65.1 59 49.2
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 1.3e-08 64.7 67 49.3
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 1.7e-08 64.3 91 41.8
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 1.7e-08 64.3 91 41.8
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 2.2e-08 63.9 70 47.1
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 2.2e-08 63.9 102 38.2
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.2e-08 63.9 152 33.6
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 2.9e-08 63.5 60 53.3
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 3.8e-08 63.2 182 30.8
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 3.8e-08 63.2 222 28.4
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 3.8e-08 63.2 70 42.9
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 3.8e-08 63.2 92 44.6
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 3.8e-08 63.2 200 33.0
MBI15_g23247_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 6.4e-08 62.4 151 35.8
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 6.4e-08 62.4 186 30.6
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 6.4e-08 62.4 145 31.7
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 8.4e-08 62.0 145 32.4
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 8.4e-08 62.0 105 42.9
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 1.1e-07 61.6 95 42.1
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 1.1e-07 61.6 79 43.0
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 1.1e-07 61.6 136 33.8
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 1.4e-07 61.2 69 44.9
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 1.4e-07 61.2 117 40.2
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 1.4e-07 61.2 66 51.5
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 1.4e-07 61.2 82 42.7
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 1.4e-07 61.2 220 29.1
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.9e-07 60.8 80 40.0
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 2.4e-07 60.5 69 46.4
MBI15_g23251_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.4e-07 60.5 152 32.9
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 4.1e-07 59.7 198 27.8
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 4.1e-07 59.7 106 33.0
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 5.4e-07 59.3 60 53.3
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 5.4e-07 59.3 75 48.0
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 5.4e-07 59.3 90 43.3
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 5.4e-07 59.3 76 44.7
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 5.4e-07 59.3 141 34.8
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 7.1e-07 58.9 158 36.1
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 7.1e-07 58.9 125 32.0
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 7.1e-07 58.9 76 43.4
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 9.2e-07 58.5 169 31.4
Migut.E00657 Erythranthe guttata HOM05D007431 ORTHO05D008438 9.2e-07 58.5 90 36.7
Oeu006325.1 Olea europaea HOM05D007431 ORTHO05D008438 9.2e-07 58.5 116 34.5
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 1.2e-06 58.2 65 44.6
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 1.6e-06 57.8 162 34.0
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 2.1e-06 57.4 95 35.8
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 2.1e-06 57.4 159 31.4
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 2.1e-06 57.4 141 32.6
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 2.1e-06 57.4 87 41.4
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 2.1e-06 57.4 214 31.3
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 3.5e-06 56.6 145 33.8
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 4.6e-06 56.2 151 31.1
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 4.6e-06 56.2 199 30.2
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 6.0e-06 55.8 134 35.8
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 6.0e-06 55.8 109 39.4
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 7.8e-06 55.5 143 33.6
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 7.8e-06 55.5 198 27.3
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 7.8e-06 55.5 279 33.0


User provided reference genes

Program Settings