Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.2e-180 635.6 334 100.0
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.9e-71 273.1 236 66.9
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.9e-70 270.4 232 67.7
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 7.0e-70 268.5 230 65.7
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 7.0e-70 268.5 232 64.7
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.6e-69 267.3 240 64.6
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 6.0e-69 265.4 232 65.1
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 6.0e-69 265.4 240 65.4
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 6.0e-69 265.4 237 63.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 7.8e-69 265.0 238 65.1
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.7e-68 263.8 237 63.7
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 3.0e-68 263.1 286 57.7
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 3.0e-68 263.1 233 64.8
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 8.6e-68 261.5 237 63.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.5e-67 260.8 228 65.4
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 5.6e-67 258.8 302 55.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 7.3e-67 258.5 239 64.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 7.3e-67 258.5 239 62.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 9.5e-67 258.1 235 65.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.6e-66 257.3 236 62.3
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 3.6e-66 256.1 238 63.4
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 8.1e-66 255.0 224 65.2
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.1e-65 254.6 241 62.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.1e-65 254.6 232 63.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 2.3e-65 253.4 228 64.0
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.3e-65 253.4 235 62.6
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 3.1e-65 253.1 242 62.0
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 4.0e-65 252.7 224 64.7
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 4.0e-65 252.7 240 61.7
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.0e-64 250.4 230 64.3
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 2.0e-64 250.4 257 59.1
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 2.0e-64 250.4 238 62.2
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 4.4e-64 249.2 239 62.3
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 9.8e-64 248.1 234 61.5
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.3e-63 247.7 242 61.2
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.3e-63 247.7 231 62.8
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.9e-63 246.5 241 59.8
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.9e-63 246.5 234 62.0
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 2.9e-63 246.5 233 60.5
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.4e-62 244.2 238 60.1
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.4e-62 243.4 229 62.0
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.6e-61 240.7 231 61.9
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.5e-61 239.6 236 58.9
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 3.5e-61 239.6 237 59.9
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.0e-60 238.0 236 59.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 2.3e-60 236.9 229 62.4
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 3.0e-60 236.5 223 61.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.0e-60 236.5 238 58.4
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 5.1e-60 235.7 229 59.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 8.6e-60 235.0 215 62.8
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 8.6e-60 235.0 228 60.5
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.9e-59 233.8 222 61.3
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 4.3e-59 232.6 229 60.7
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 5.6e-59 232.3 231 57.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 9.5e-59 231.5 197 65.5
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 9.5e-59 231.5 228 59.6
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.2e-58 231.1 234 59.8
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.2e-58 231.1 229 59.4
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 2.8e-58 229.9 220 60.9
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 6.2e-58 228.8 237 58.2
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 6.2e-58 228.8 228 58.3
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.3e-57 226.9 224 58.0
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 6.8e-57 225.3 240 56.2
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.2e-56 224.6 228 59.2
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.6e-56 223.4 236 56.4
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 3.4e-56 223.0 230 59.6
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 9.9e-56 221.5 229 57.2
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 9.9e-56 221.5 242 54.1
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.3e-55 221.1 229 56.8
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.9e-55 219.9 223 60.5
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.8e-55 219.5 223 60.5
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.4e-55 218.8 223 60.5
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.4e-55 218.8 223 60.5
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.4e-54 217.6 237 56.5
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.4e-54 217.6 255 53.7
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.9e-54 217.2 175 67.4
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.9e-54 217.2 175 68.6
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.9e-54 217.2 161 74.5
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 2.4e-54 216.9 220 57.3
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 3.2e-54 216.5 175 66.9
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 4.1e-54 216.1 175 66.9
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 7.1e-54 215.3 222 58.1
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.2e-53 214.5 220 56.4
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.6e-53 214.2 228 59.2
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.6e-53 214.2 231 55.8
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 3.5e-53 213.0 222 56.8
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 3.5e-53 213.0 222 58.1
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 6.0e-53 212.2 173 65.9
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 7.8e-53 211.8 227 55.9
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.0e-52 211.5 230 55.7
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.3e-52 211.1 218 56.9
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.3e-52 210.3 178 69.7
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 3.9e-52 209.5 218 56.4
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 5.1e-52 209.1 243 53.5
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 7.3e-51 205.3 202 60.9
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 9.6e-51 204.9 134 78.4
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 2.1e-50 203.8 147 75.5
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 8.1e-50 201.8 249 50.2
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.1e-49 199.9 179 63.1
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.0e-49 199.5 150 71.3
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.2e-48 198.0 170 62.9
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.2e-48 198.0 150 70.7
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 7.6e-48 195.3 148 67.6
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.7e-47 194.1 267 48.3
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.3e-44 184.5 177 60.5
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.3e-44 184.5 171 59.1
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.3e-43 179.9 203 58.1
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.4e-41 173.7 176 59.1
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.4e-38 163.7 170 55.9
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.9e-36 156.4 199 50.8
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.9e-35 154.1 167 56.9
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.9e-35 154.1 199 53.3
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.6e-34 151.0 140 62.1
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.8e-33 147.5 111 70.3
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.6e-32 143.7 111 67.6
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 2.4e-30 137.1 145 51.0
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.1e-30 135.6 144 51.4
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.3e-28 130.6 144 52.1
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 6.2e-26 122.5 145 49.0
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 7.6e-24 115.5 104 56.7
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 2.8e-18 97.1 75 65.3
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.4e-17 94.7 209 35.9
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.5e-16 89.7 106 45.3
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.2e-14 83.2 115 48.7
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.5e-08 64.7 67 53.7


User provided reference genes

Program Settings