Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.2e-169 599.7 306 100.0
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.2e-113 413.7 300 73.0
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 1.4e-112 410.2 300 70.7
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 8.3e-110 401.0 300 68.7
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 8.3e-110 401.0 304 69.4
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.1e-109 400.6 298 70.8
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.6e-108 396.7 281 70.5
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 2.1e-108 396.4 295 70.2
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 3.5e-108 395.6 275 73.8
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 4.6e-108 395.2 287 71.8
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 3.9e-107 392.1 300 68.7
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 6.6e-107 391.3 275 73.1
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 6.6e-107 391.3 301 67.1
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 8.6e-107 391.0 264 74.6
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 8.6e-107 391.0 285 69.8
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 9.5e-106 387.5 280 71.1
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 4.7e-105 385.2 256 75.4
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 8.1e-105 384.4 300 69.3
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.8e-104 383.3 289 70.6
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 3.1e-104 382.5 299 67.6
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 6.8e-104 381.3 291 69.8
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.5e-103 380.2 301 68.4
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 2.0e-103 379.8 300 67.0
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 7.5e-103 377.9 299 65.9
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 1.3e-102 377.1 298 66.4
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 1.7e-102 376.7 271 69.4
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 2.9e-102 375.9 241 77.2
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 3.7e-102 375.6 287 68.6
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 4.9e-102 375.2 283 67.5
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 1.1e-101 374.0 299 64.5
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 2.4e-101 372.9 300 67.3
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 4.1e-101 372.1 274 71.5
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 9.2e-101 370.9 284 66.9
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 9.2e-101 370.9 287 68.3
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 1.6e-100 370.2 303 63.7
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 2.1e-100 369.8 273 68.9
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 2.7e-100 369.4 293 67.6
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 7.8e-100 367.9 273 69.6
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.0e-99 367.5 266 68.8
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.7e-99 366.7 253 71.1
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 2.3e-99 366.3 242 75.2
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 3.9e-99 365.5 271 66.4
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 5.1e-99 365.2 280 66.8
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 5.1e-99 365.2 264 71.6
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 5.1e-99 365.2 272 69.1
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.9e-98 363.2 291 67.0
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 2.5e-98 362.8 277 67.9
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.3e-98 362.1 276 69.9
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 5.6e-98 361.7 278 68.0
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 5.6e-98 361.7 302 65.2
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 7.3e-98 361.3 302 60.6
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 7.3e-98 361.3 263 69.6
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 9.5e-98 360.9 303 65.3
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 9.5e-98 360.9 276 69.9
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 9.5e-98 360.9 258 70.2
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 1.2e-97 360.5 242 72.3
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.1e-97 359.8 283 67.8
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 2.1e-97 359.8 299 64.2
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 3.6e-97 359.0 271 66.4
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.1e-96 357.5 311 63.3
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.4e-96 357.1 292 65.4
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 1.4e-96 357.1 272 65.8
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.8e-96 356.7 264 69.3
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.4e-96 356.3 264 69.7
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 3.1e-96 355.9 258 70.9
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 3.1e-96 355.9 291 67.0
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 6.8e-96 354.8 271 69.4
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.8e-96 354.8 284 67.6
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.3e-94 350.5 278 68.3
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 8.4e-94 347.8 257 68.5
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.4e-93 347.1 277 64.3
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 9.2e-93 344.4 275 66.2
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.6e-92 343.6 234 74.8
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 2.7e-92 342.8 256 69.9
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.0e-91 340.9 265 64.2
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 5.1e-91 338.6 256 69.1
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 5.1e-91 338.6 277 62.8
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 5.1e-91 338.6 277 62.8
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 1.9e-90 336.7 273 67.4
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 7.3e-90 334.7 229 74.2
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.6e-89 333.6 292 59.9
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.4e-88 330.5 250 68.8
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.2e-87 327.4 227 74.4
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 2.6e-87 326.2 255 64.7
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 7.1e-85 318.2 270 63.3
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 8.7e-83 311.2 241 66.0
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 3.3e-82 309.3 255 62.4
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 5.6e-82 308.5 235 65.1
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 1.3e-81 307.4 231 67.1
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 1.7e-78 297.0 201 73.6
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 2.9e-78 296.2 235 67.2
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 3.0e-75 286.2 224 64.3
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 6.7e-75 285.0 221 66.1
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.1e-74 284.3 253 62.5
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 5.3e-72 275.4 187 72.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 5.5e-69 265.4 287 53.3
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 4.9e-62 242.3 233 54.5
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 6.5e-62 241.9 228 55.3
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.0e-54 218.0 294 46.6
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.2e-52 211.1 258 43.0
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.2e-45 186.4 142 64.8
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 2.0e-42 177.2 239 43.1
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.4e-40 171.0 222 41.4
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.4e-35 154.5 221 43.9
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 4.8e-33 146.0 242 37.2
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 8.0e-28 128.6 133 54.1
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 2.3e-27 127.1 104 59.6
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.1e-21 108.2 118 51.7
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 1.9e-21 107.5 108 52.8
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.4e-16 91.3 100 53.0
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 3.8e-14 83.2 59 69.5
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.5e-13 81.3 54 66.7
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 3.3e-13 80.1 103 50.5
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 4.9e-09 66.2 54 55.6
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 1.1e-08 65.1 53 64.2
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 1.1e-08 65.1 53 64.2
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 3.2e-08 63.5 53 62.3
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.6e-06 55.5 46 58.7


User provided reference genes

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