Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.4e-292 1008.8 492 100.0
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 8.0e-163 577.8 483 60.5
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.0e-154 549.3 413 63.9
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.4e-153 545.8 399 65.4
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 4.4e-153 545.4 436 63.8
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 9.8e-153 544.3 506 58.3
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 8.3e-152 541.2 502 58.0
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.1e-151 540.8 496 57.7
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.8e-151 540.0 507 56.8
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 5.4e-151 538.5 506 57.1
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 9.2e-151 537.7 500 56.4
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.2e-150 537.3 496 57.1
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 5.9e-150 535.0 512 58.0
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.3e-149 533.9 503 56.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.3e-149 533.9 504 58.1
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 2.3e-149 533.1 496 56.7
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.0e-149 531.9 474 59.7
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 5.0e-149 531.9 505 56.8
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.2e-147 527.3 472 57.4
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.2e-147 527.3 478 58.6
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 3.6e-147 525.8 500 56.2
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 4.7e-147 525.4 500 55.2
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.4e-146 523.9 376 68.4
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.4e-146 523.9 376 68.4
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.8e-146 523.5 496 58.5
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 5.2e-146 521.9 477 57.7
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 6.8e-146 521.5 507 57.4
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.5e-145 520.4 451 61.0
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.0e-145 520.0 500 54.2
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.6e-145 519.6 392 65.1
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 5.8e-145 518.5 475 56.0
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 5.8e-145 518.5 498 58.6
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.7e-144 516.9 504 56.2
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.7e-144 516.9 509 54.8
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 6.4e-144 515.0 508 53.9
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.4e-143 513.8 503 54.9
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.0e-143 511.5 497 56.9
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 9.2e-143 511.1 482 56.0
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 4.6e-142 508.8 514 52.5
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.3e-141 507.3 496 57.3
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.7e-141 506.9 501 53.3
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 5.0e-141 505.4 395 62.8
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.5e-140 503.8 373 64.1
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 4.7e-139 498.8 372 63.2
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 8.0e-139 498.0 409 61.1
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.3e-138 496.5 494 51.4
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 3.1e-138 496.1 364 65.9
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.2e-137 494.2 442 56.6
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 3.4e-137 492.7 409 60.4
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 4.4e-137 492.3 369 63.7
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 7.5e-137 491.5 412 60.9
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 9.8e-137 491.1 412 60.9
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 9.8e-137 491.1 409 60.1
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 9.8e-137 491.1 443 56.0
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.2e-135 486.1 414 59.7
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 3.2e-135 486.1 497 51.9
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.1e-135 485.7 467 54.6
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 9.2e-135 484.6 481 52.8
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 9.2e-135 484.6 377 59.7
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 1.6e-134 483.8 394 63.5
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.7e-134 483.0 441 57.8
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 6.0e-134 481.9 494 53.0
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.3e-133 479.9 396 61.1
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.3e-133 479.9 396 61.1
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.3e-133 479.9 396 61.1
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 6.6e-133 478.4 472 55.3
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.5e-132 477.2 385 61.6
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.5e-132 477.2 413 59.1
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.9e-132 476.9 381 61.7
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.2e-131 474.2 438 57.3
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.2e-131 474.2 497 51.5
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.4e-130 470.7 407 59.2
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.8e-130 470.3 397 59.7
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.8e-130 470.3 442 56.6
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 2.3e-130 469.9 404 57.9
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 6.8e-130 468.4 442 56.6
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.5e-129 467.2 428 57.0
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 5.8e-129 465.3 410 59.3
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 9.9e-129 464.5 378 60.3
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.4e-127 460.7 454 55.1
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.4e-127 460.7 392 58.4
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.9e-127 460.3 394 60.7
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 3.0e-125 453.0 446 54.3
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.9e-125 452.6 435 55.6
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 5.1e-125 452.2 405 56.5
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 8.1e-123 444.9 409 56.7
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.4e-122 443.4 378 59.8
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 8.9e-122 441.4 412 56.3
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.4e-121 439.1 412 55.8
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 9.9e-121 438.0 373 59.5
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 8.4e-120 434.9 411 56.0
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.2e-119 433.0 413 55.4
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 4.2e-119 432.6 385 56.9
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.2e-119 431.4 411 55.7
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.6e-118 429.1 373 58.7
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 3.9e-117 426.0 392 55.9
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.3e-114 415.6 371 53.6
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.2e-105 387.9 441 49.0
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.2e-97 361.3 423 45.6
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-85 321.6 483 43.9
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.3e-83 314.7 324 51.9
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.8e-83 313.5 407 42.5
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.4e-82 311.2 349 48.7
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.7e-75 287.7 312 50.3
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.4e-74 283.9 207 63.8
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 5.3e-74 282.7 255 55.3
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.8e-69 267.7 503 36.6
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 4.5e-65 253.1 392 40.1
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.8e-58 231.1 406 37.9
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 2.1e-46 191.0 308 39.3
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 6.8e-37 159.5 235 47.7
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.3e-35 152.9 376 32.2
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.2e-30 138.7 112 63.4
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 2.8e-30 137.5 178 46.1
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.0e-29 135.6 328 34.8
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 7.5e-28 129.4 129 53.5
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 4.6e-25 120.2 370 30.5
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 7.8e-25 119.4 264 33.7
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 8.9e-21 105.9 64 71.9
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.0e-08 64.3 227 26.9
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.2e-06 58.9 59 49.2


User provided reference genes

Program Settings