Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 0.0e+00 2043.5 1175 100.0
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 1.8e-213 747.3 1294 47.8
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 2.2e-211 740.3 1261 47.9
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 1.4e-210 737.6 1207 47.8
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 4.6e-209 732.6 1263 48.0
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 6.7e-208 728.8 1260 47.6
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 1.3e-206 724.5 1263 47.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 3.2e-202 709.9 1263 46.0
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.2e-201 708.0 1241 45.6
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 1.6e-201 707.6 1254 46.4
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 3.9e-200 703.0 1256 46.3
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.5e-199 701.0 1248 46.7
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.4e-199 698.7 1257 45.9
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 6.3e-198 695.7 1229 46.9
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 8.2e-198 695.3 1256 46.1
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 4.1e-197 693.0 1245 46.2
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 2.0e-196 690.6 1249 46.1
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.7e-195 687.6 1256 45.8
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 2.2e-195 687.2 1266 46.1
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 7.2e-194 682.2 1250 46.2
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 1.8e-192 677.6 1207 46.7
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 3.9e-192 676.4 1252 46.5
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 3.9e-192 676.4 1201 46.5
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 3.9e-192 676.4 1254 45.7
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 5.7e-191 672.5 1255 45.3
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 7.4e-191 672.2 1249 47.7
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 2.2e-190 670.6 1257 45.0
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 5.3e-189 666.0 1230 43.5
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 1.5e-186 657.9 1227 45.0
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 3.2e-186 656.8 1257 45.2
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.2e-185 654.8 1254 44.9
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 3.0e-184 650.2 1257 47.0
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.2e-184 649.4 1252 45.8
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.1e-181 641.7 1257 44.3
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 9.1e-181 638.6 1263 44.3
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 4.5e-180 636.3 1287 44.8
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 3.8e-179 633.3 1250 43.7
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 1.2e-177 628.2 1222 44.7
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 4.7e-177 626.3 1256 44.5
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 2.6e-175 620.5 1295 43.7
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 7.5e-175 619.0 1255 43.7
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 6.3e-174 615.9 1254 43.9
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 2.4e-173 614.0 1253 45.3
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 8.5e-171 605.5 1225 43.3
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.5e-170 604.7 1407 40.2
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 7.2e-170 602.4 1257 44.0
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 9.4e-170 602.1 1250 45.0
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 3.4e-167 593.6 1255 43.6
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 1.3e-166 591.7 1283 42.7
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 1.6e-161 574.7 1265 41.8
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.0e-160 572.0 1300 38.8
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 1.4e-160 571.6 1158 45.0
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 3.7e-158 563.5 1215 39.6
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 1.8e-157 561.2 1018 48.1
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 2.3e-155 554.3 1264 41.5
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 3.0e-155 553.9 1283 41.8
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 7.8e-148 529.3 1207 40.1
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 3.1e-144 517.3 1284 42.2
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 2.0e-143 514.6 1287 40.0
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.6e-143 514.2 1297 37.4
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 5.8e-143 513.1 1291 42.4
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 4.9e-142 510.0 1257 40.0
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 1.2e-140 505.4 1241 40.9
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 4.9e-134 483.4 1261 41.1
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.7e-131 474.9 1253 38.5
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 1.2e-129 468.8 1096 42.1
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 2.8e-129 467.6 1208 38.9
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 6.9e-128 463.0 1243 39.2
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 1.1e-125 455.7 1185 39.6
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 1.9e-125 454.9 1198 39.5
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 1.9e-122 444.9 1208 38.9
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 1.3e-121 442.2 1236 38.9
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.1e-121 441.4 1052 41.7
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 3.6e-121 440.7 1225 37.7
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 7.6e-119 433.0 1229 37.7
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 1.7e-118 431.8 1185 38.6
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 2.2e-118 431.4 1185 38.4
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 1.1e-114 419.1 1217 37.6
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 3.6e-113 414.1 1199 36.9
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 5.3e-112 410.2 1184 37.9
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 9.9e-111 406.0 1262 36.8
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 4.2e-109 400.6 1203 34.7
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 2.1e-108 398.3 1055 40.1
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 3.5e-108 397.5 1203 33.0
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.3e-107 395.6 495 51.5
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 3.3e-106 391.0 1227 35.9
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 3.4e-103 380.9 1194 32.2
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 5.8e-103 380.2 1216 37.4
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 2.2e-102 378.3 1146 35.4
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 4.9e-102 377.1 1140 35.3
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 4.9e-102 377.1 1140 35.3
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 4.9e-102 377.1 1190 35.5
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.1e-101 375.9 1146 35.3
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.4e-101 375.6 1241 31.8
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 9.3e-101 372.9 1213 34.9
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 3.9e-99 367.5 1244 37.0
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 3.9e-91 340.9 1147 37.3
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 3.6e-84 317.8 421 48.7
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 4.4e-82 310.8 443 48.5
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 5.0e-78 297.4 1015 31.8
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 9.4e-77 293.1 853 41.0
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 1.5e-74 285.8 1272 32.2
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 6.3e-73 280.4 1065 35.1
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 7.0e-72 276.9 327 54.1
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 5.2e-67 260.8 1271 32.1
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 7.5e-66 256.9 1355 30.7
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.2e-63 249.6 514 38.3
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 5.9e-63 247.3 1029 34.7
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 5.9e-63 247.3 580 37.2
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 8.5e-62 243.4 1103 28.6
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 5.2e-59 234.2 900 30.9
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 6.3e-57 227.3 277 50.5
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 9.1e-56 223.4 1244 30.6
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 2.3e-51 208.8 1029 28.8
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 2.2e-49 202.2 497 36.2
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 2.2e-49 202.2 220 55.9
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 7.8e-47 193.7 192 54.7
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 8.9e-43 180.3 318 41.8
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 8.3e-41 173.7 451 33.5
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 2.0e-39 169.1 422 35.5
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 1.3e-38 166.4 378 34.7
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 1.1e-35 156.8 141 61.7
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 1.4e-35 156.4 128 64.8
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 1.4e-32 146.4 681 28.6
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 1.6e-31 142.9 225 45.3
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 1.6e-28 132.9 1008 30.4
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.2e-23 116.7 231 51.1
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 7.8e-23 114.0 124 62.1
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.9e-22 111.7 129 58.1
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.5e-21 109.8 687 26.9
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 3.3e-21 108.6 147 44.2
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 3.3e-21 108.6 64 76.6
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 2.4e-16 92.4 127 55.1
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 7.8e-15 87.4 65 58.5
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 1.0e-14 87.0 627 23.8
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 2.4e-11 75.9 197 29.4
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 6.9e-11 74.3 72 47.2
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 9.0e-11 73.9 68 60.3
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 1.7e-09 69.7 67 56.7
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 3.2e-08 65.5 216 30.6
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 6.0e-07 61.2 126 31.0


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