Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 2.3e-42 175.3 94 100.0
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 3.8e-21 104.8 141 48.9
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 4.6e-19 97.8 116 48.3
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.1e-17 93.2 141 44.7
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 1.5e-17 92.8 141 43.3
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 3.3e-17 91.7 141 41.8
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 5.7e-17 90.9 141 41.8
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 5.7e-17 90.9 141 44.0
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 7.4e-17 90.5 141 41.8
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 7.4e-17 90.5 141 41.1
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 9.7e-17 90.1 141 41.1
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 1.3e-16 89.7 141 41.8
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 1.3e-16 89.7 127 44.1
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 1.3e-16 89.7 141 40.4
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 1.3e-16 89.7 141 40.4
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 1.3e-16 89.7 141 40.4
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 1.6e-16 89.4 141 40.4
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 2.2e-16 89.0 141 40.4
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.2e-16 89.0 141 40.4
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.2e-16 89.0 141 40.4
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.2e-16 89.0 141 40.4
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 2.2e-16 89.0 141 40.4
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 2.8e-16 88.6 141 39.7
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.8e-16 88.6 141 39.7
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 2.8e-16 88.6 141 39.7
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.7e-16 88.2 115 43.5
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 3.7e-16 88.2 145 40.0
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 3.7e-16 88.2 141 42.6
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 3.7e-16 88.2 141 39.0
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 4.8e-16 87.8 141 39.7
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 4.8e-16 87.8 141 39.7
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 4.8e-16 87.8 141 41.1
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 6.3e-16 87.4 141 39.0
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 6.3e-16 87.4 141 41.1
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 6.3e-16 87.4 141 41.1
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 8.2e-16 87.0 141 40.4
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 8.2e-16 87.0 141 41.1
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 8.2e-16 87.0 141 41.1
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.4e-15 86.3 141 41.1
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.4e-15 86.3 65 64.6
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 1.4e-15 86.3 141 41.8
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.4e-15 86.3 65 67.7
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 1.8e-15 85.9 65 66.2
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 1.8e-15 85.9 141 39.0
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 1.8e-15 85.9 91 53.8
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 2.4e-15 85.5 141 39.7
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 3.1e-15 85.1 65 67.7
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 3.1e-15 85.1 141 39.7
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 3.1e-15 85.1 141 41.1
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 4.1e-15 84.7 65 63.1
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 5.3e-15 84.3 65 67.7
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 5.3e-15 84.3 85 57.6
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 5.3e-15 84.3 141 38.3
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 6.9e-15 84.0 65 66.2
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 9.0e-15 83.6 143 39.9
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 9.0e-15 83.6 141 39.0
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 9.0e-15 83.6 63 66.7
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 9.0e-15 83.6 65 64.6
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 9.0e-15 83.6 65 64.6
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 9.0e-15 83.6 65 64.6
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 9.0e-15 83.6 141 38.3
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 9.0e-15 83.6 141 39.0
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 1.2e-14 83.2 141 40.4
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.2e-14 83.2 115 44.3
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 1.2e-14 83.2 141 38.3
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 1.5e-14 82.8 65 63.1
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 1.5e-14 82.8 63 63.5
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 1.5e-14 82.8 141 38.3
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 1.5e-14 82.8 78 56.4
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 2.6e-14 82.0 65 66.2
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 3.4e-14 81.6 65 63.1
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 3.4e-14 81.6 86 55.8
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 4.5e-14 81.3 63 65.1
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 7.7e-14 80.5 65 61.5
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 7.7e-14 80.5 65 61.5
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 7.7e-14 80.5 65 61.5
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 7.7e-14 80.5 65 61.5
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 7.7e-14 80.5 65 61.5
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 7.7e-14 80.5 65 64.6
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.0e-13 80.1 65 61.5
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.0e-13 80.1 65 61.5
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 1.0e-13 80.1 65 61.5
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 1.0e-13 80.1 65 61.5
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 1.0e-13 80.1 65 61.5
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 1.0e-13 80.1 65 63.1
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 1.3e-13 79.7 63 61.9
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 1.7e-13 79.3 65 58.5
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 2.9e-13 78.6 144 40.3
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 3.8e-13 78.2 65 61.5
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 5.0e-13 77.8 133 39.8
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 8.5e-13 77.0 132 39.4
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 1.1e-12 76.6 65 61.5
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 1.1e-12 76.6 65 58.5
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 1.1e-12 76.6 63 58.7
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 1.9e-12 75.9 78 53.8
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 2.5e-12 75.5 65 58.5
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 3.2e-12 75.1 144 38.2
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 7.2e-12 73.9 51 70.6
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 9.4e-12 73.6 65 61.5
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.2e-11 73.2 74 56.8
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.2e-11 73.2 74 56.8
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 2.1e-11 72.4 92 48.9
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 2.7e-11 72.0 65 60.0
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 1.0e-10 70.1 87 47.1
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 5.1e-10 67.8 178 32.6
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 5.1e-10 67.8 104 43.3
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 5.1e-10 67.8 88 46.6
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 6.7e-10 67.4 107 47.7
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.3e-09 64.7 87 42.5
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 4.3e-09 64.7 141 34.8
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.7e-09 64.3 87 41.4
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.1e-07 60.1 63 50.8
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.1e-07 60.1 71 46.5
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.1e-07 60.1 63 50.8
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 2.4e-07 58.9 181 29.8
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 2.4e-07 58.9 121 34.7
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 6.9e-07 57.4 79 44.3
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 1.2e-06 56.6 65 46.2
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.5e-06 54.7 63 47.6


User provided reference genes

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