Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0387 Punica granatum HOM05D006052 ORTHO05D007319 1.7e-51 205.7 101 100.0
Manes.04G131832 Manihot esculenta HOM05D006052 ORTHO05D007319 1.2e-41 172.9 99 85.9
Eucgr.F03060 Eucalyptus grandis HOM05D006052 ORTHO05D007319 7.9e-41 170.2 98 86.7
CiPaw.01G233600 Carya illinoinensis HOM05D006052 ORTHO05D007319 1.5e-39 166.0 99 83.8
Potri.001G187200 Populus trichocarpa HOM05D006052 ORTHO05D007319 9.6e-39 163.3 98 81.6
Thecc.06G096200 Theobroma cacao HOM05D006052 ORTHO05D007319 1.6e-38 162.5 99 77.8
CANSAT56G3932 Cannabis sativa HOM05D006052 ORTHO05D007319 2.1e-38 162.2 99 79.8
Migut.I00924 Erythranthe guttata HOM05D006052 ORTHO05D007319 2.8e-38 161.8 96 79.2
Zm00001eb295530 Zea mays HOM05D006052 ORTHO05D007319 2.8e-38 161.8 96 83.3
arahy.Tifrunner.gnm1.ann1.69I5GX Arachis hypogaea HOM05D006052 ORTHO05D007319 4.8e-38 161.0 99 76.8
arahy.Tifrunner.gnm1.ann1.NZ5FDW Arachis hypogaea HOM05D006052 ORTHO05D007319 4.8e-38 161.0 99 76.8
arahy.Tifrunner.gnm1.ann1.S0BGA2 Arachis hypogaea HOM05D006052 ORTHO05D007319 4.8e-38 161.0 99 76.8
Dinv37999 Davidia involucrata HOM05D006052 ORTHO05D007319 4.8e-38 161.0 99 78.8
Gohir.A05G128200 Gossypium hirsutum HOM05D006052 ORTHO05D007319 4.8e-38 161.0 96 77.1
MSTRG.22652 Avicennia marina HOM05D006052 ORTHO05D007319 6.3e-38 160.6 96 78.1
MD17G1187600 Malus domestica HOM05D006052 ORTHO05D007319 8.2e-38 160.2 98 80.6
Haze_16332 Corylus avellana HOM05D006052 ORTHO05D007319 1.1e-37 159.8 95 82.1
MBI04_g27065_MAGBIO Magnolia biondii HOM05D006052 ORTHO05D007319 1.4e-37 159.5 96 79.2
Ciclev10026826m.g Citrus clementina HOM05D006052 ORTHO05D007319 1.8e-37 159.1 99 78.8
CSS0026597 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 2.4e-37 158.7 99 78.8
Gohir.D05G132700 Gossypium hirsutum HOM05D006052 ORTHO05D007319 2.4e-37 158.7 96 76.0
Gorai.009G136400 Gossypium raimondii HOM05D006052 ORTHO05D007319 2.4e-37 158.7 96 76.0
Prupe.3G063000 Prunus persica HOM05D006052 ORTHO05D007319 2.4e-37 158.7 98 80.6
TAR626G0898 Trochodendron aralioides HOM05D006052 ORTHO05D007319 5.3e-37 157.5 96 79.2
TAR636G2101 Trochodendron aralioides HOM05D006052 ORTHO05D007319 5.3e-37 157.5 96 79.2
Nn3g18169 Nelumbo nucifera HOM05D006052 ORTHO05D007319 6.9e-37 157.1 96 77.1
Zm00001eb002070 Zea mays HOM05D006052 ORTHO05D007319 6.9e-37 157.1 96 81.2
TWI18G1030 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 1.2e-36 156.4 101 77.2
FAN14G5158 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.5e-36 156.0 98 78.6
Solyc03g120820.4 Solanum lycopersicum HOM05D006052 ORTHO05D007319 1.5e-36 156.0 99 76.8
PGSC0003DMG402002538 Solanum tuberosum HOM05D006052 ORTHO05D007319 1.5e-36 156.0 99 76.8
Dinv32171 Davidia involucrata HOM05D006052 ORTHO05D007319 2.0e-36 155.6 98 78.6
Actinidia39148 Actinidia chinensis HOM05D006052 ORTHO05D007319 2.6e-36 155.2 99 76.8
CSS0014721 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 2.6e-36 155.2 93 80.6
RcHm_v2.0_Chr2g0139621 Rosa chinensis HOM05D006052 ORTHO05D007319 3.4e-36 154.8 99 78.8
TWI12G0943 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 3.4e-36 154.8 98 76.5
ClCG09G001790 Citrullus lanatus HOM05D006052 ORTHO05D007319 4.5e-36 154.5 79 88.6
Eucgr.E01716 Eucalyptus grandis HOM05D006052 ORTHO05D007319 4.5e-36 154.5 99 76.8
Nitab4.5_0003039g0060 Nicotiana tabacum HOM05D006052 ORTHO05D007319 4.5e-36 154.5 94 77.7
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 7.6e-36 153.7 96 78.1
EL10Ac9g22109 Beta vulgaris HOM05D006052 ORTHO05D007319 7.6e-36 153.7 97 75.3
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 7.6e-36 153.7 98 77.6
Sc15g0001990 Simmondsia chinensis HOM05D006052 ORTHO05D007319 1.0e-35 153.3 99 75.8
Solyc12g044380.3 Solanum lycopersicum HOM05D006052 ORTHO05D007319 1.3e-35 152.9 94 78.7
Sopen12g022650 Solanum pennellii HOM05D006052 ORTHO05D007319 1.3e-35 152.9 94 78.7
PGSC0003DMG400026453 Solanum tuberosum HOM05D006052 ORTHO05D007319 1.3e-35 152.9 94 78.7
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.3e-35 152.9 87 80.5
Peaxi162Scf00038g00824 Petunia axillaris HOM05D006052 ORTHO05D007319 1.7e-35 152.5 99 74.7
FAN02G3299 Fragaria x ananassa HOM05D006052 ORTHO05D007319 2.2e-35 152.1 93 79.6
CsaV3_7G033550 Cucumis sativus L. HOM05D006052 ORTHO05D007319 2.9e-35 151.8 86 80.2
HanXRQChr02g0032361 Helianthus annuus HOM05D006052 ORTHO05D007319 2.9e-35 151.8 94 78.7
SGA_v2.0_scaffold69G23334 Striga asiatica HOM05D006052 ORTHO05D007319 2.9e-35 151.8 95 75.8
vmacro16981 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 2.9e-35 151.8 95 77.9
Cc04_g02780 Coffea canephora HOM05D006052 ORTHO05D007319 3.8e-35 151.4 94 74.5
Nitab4.5_0007758g0100 Nicotiana tabacum HOM05D006052 ORTHO05D007319 3.8e-35 151.4 92 76.1
PSO566G0324 Papaver somniferum HOM05D006052 ORTHO05D007319 3.8e-35 151.4 96 76.0
Phvul.010G146800 Phaseolus vulgaris HOM05D006052 ORTHO05D007319 3.8e-35 151.4 98 72.4
AUR62031876 Chenopodium quinoa HOM05D006052 ORTHO05D007319 6.5e-35 150.6 92 75.0
Hma1.2p1_1689F.1_g297700 Hydrangea macrophylla HOM05D006052 ORTHO05D007319 6.5e-35 150.6 81 84.0
Sed0023726 Sechium edule HOM05D006052 ORTHO05D007319 8.4e-35 150.2 86 79.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.1e-34 149.8 98 71.4
VMungo1309G2952 Vigna mungo HOM05D006052 ORTHO05D007319 1.1e-34 149.8 97 73.2
CAN.G203.53 Capsicum annuum HOM05D006052 ORTHO05D007319 1.4e-34 149.4 96 76.0
Glyma.07G017500 Glycine max HOM05D006052 ORTHO05D007319 1.4e-34 149.4 98 72.4
TPR.G14815 Trifolium pratense HOM05D006052 ORTHO05D007319 1.9e-34 149.1 98 71.4
AUR62022170 Chenopodium quinoa HOM05D006052 ORTHO05D007319 2.5e-34 148.7 94 72.3
Medtr8g013760 Medicago truncatula HOM05D006052 ORTHO05D007319 2.5e-34 148.7 98 71.4
PSO782G5494 Papaver somniferum HOM05D006052 ORTHO05D007319 3.2e-34 148.3 99 72.7
ECA232G3158 Erigeron canadensis HOM05D006052 ORTHO05D007319 4.2e-34 147.9 93 76.3
Medtr3g112340 Medicago truncatula HOM05D006052 ORTHO05D007319 4.2e-34 147.9 98 71.4
AL1G38650 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 5.5e-34 147.5 93 74.2
Thhalv10019223m.g Eutrema salsugineum HOM05D006052 ORTHO05D007319 7.2e-34 147.1 94 73.4
Glyma.08G202700 Glycine max HOM05D006052 ORTHO05D007319 7.2e-34 147.1 98 71.4
Sp5g24870 Schrenkiella parvula HOM05D006052 ORTHO05D007319 7.2e-34 147.1 94 72.3
AT1G66590 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 9.3e-34 146.7 99 69.7
AT1G69750 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 9.3e-34 146.7 99 69.7
HanXRQChr16g0501261 Helianthus annuus HOM05D006052 ORTHO05D007319 9.3e-34 146.7 96 74.0
AL2G28930 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 1.2e-33 146.4 99 69.7
Lalb_Chr01g0013101 Lupinus albus HOM05D006052 ORTHO05D007319 1.2e-33 146.4 93 72.0
Lalb_Chr01g0013121 Lupinus albus HOM05D006052 ORTHO05D007319 1.2e-33 146.4 93 72.0
THA.LOC104800715 Tarenaya hassleriana HOM05D006052 ORTHO05D007319 1.2e-33 146.4 83 80.7
BcaB03g15501 Brassica carinata HOM05D006052 ORTHO05D007319 1.6e-33 146.0 94 72.3
Carub.0002s1643 Capsella rubella HOM05D006052 ORTHO05D007319 1.6e-33 146.0 99 68.7
GSVIVG01017036001 Vitis vinifera HOM05D006052 ORTHO05D007319 1.6e-33 146.0 99 70.7
unitig_748.g8097 Utricularia gibba HOM05D003052 ORTHO05D007319 2.1e-33 145.6 92 75.0
BcaB03g14752 Brassica carinata HOM05D006052 ORTHO05D007319 3.5e-33 144.8 99 69.7
HPP92_024167 Vanilla planifolia HOM05D006052 ORTHO05D007319 3.5e-33 144.8 84 79.8
Lj3g0026702 Lotus japonicus HOM05D006052 ORTHO05D007319 4.6e-33 144.4 88 75.0
Rhsim12G0201800 Rhododendron simsii HOM05D006052 ORTHO05D007319 4.6e-33 144.4 117 65.0
DCAR_026339 Daucus carota HOM05D006052 ORTHO05D007319 1.0e-32 143.3 99 68.7
A07p36160 Brassica napus HOM05D006052 ORTHO05D007319 3.0e-32 141.7 92 71.7
BraA07t31192Z Brassica rapa HOM05D006052 ORTHO05D007319 3.0e-32 141.7 92 71.7
C06p43560 Brassica napus HOM05D006052 ORTHO05D007319 5.1e-32 141.0 92 71.7
BolC6t39428H Brassica oleracea HOM05D006052 ORTHO05D007319 5.1e-32 141.0 92 71.7
CDE02G2125 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 8.7e-32 140.2 94 70.2
CARHR062820 Cardamine hirsuta HOM05D006052 ORTHO05D007319 1.1e-31 139.8 95 68.4
CDE08G0656 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 2.5e-31 138.7 91 73.6
Aa31LG7G8230 Aethionema arabicum HOM05D006052 ORTHO05D007319 2.2e-30 135.6 88 71.6
BcaC03g15114 Brassica carinata HOM05D006052 ORTHO05D007319 1.1e-29 133.3 82 72.0
BolC2t08748H Brassica oleracea HOM05D006052 ORTHO05D007319 1.1e-29 133.3 82 72.0
BraA07t30774Z Brassica rapa HOM05D006052 ORTHO05D007319 5.3e-29 131.0 77 74.0
QL05p021035 Quercus lobata HOM05D006052 ORTHO05D007319 9.0e-29 130.2 119 58.8
A07p31390 Brassica napus HOM05D006052 ORTHO05D007319 1.2e-28 129.8 75 74.7
Mapoly0075s0024 Marchantia polymorpha HOM05D006052 ORTHO05D007319 2.0e-28 129.0 80 72.5
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 7.7e-28 127.1 66 83.3
SalBow6G3458 Salvia bowleyana HOM05D006052 ORTHO05D007319 1.7e-27 125.9 66 81.8
QL05p020889 Quercus lobata HOM05D006052 ORTHO05D007319 2.2e-27 125.6 68 82.4
C02p26750 Brassica napus HOM05D006052 ORTHO05D007319 6.5e-27 124.0 89 62.9
Psat4g197560 Pisum sativum HOM05D006052 ORTHO05D007319 6.5e-27 124.0 66 81.8
SEGI_14426 Sequoiadendron giganteum HOM05D006052 ORTHO05D007319 1.4e-26 122.9 66 81.8
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 5.5e-26 120.9 65 81.5
SMO271G0187 Selaginella moellendorffii HOM05D006052 ORTHO05D007319 7.9e-25 117.1 84 59.5
Pp3c14_6840 Physcomitrium patens HOM05D006052 ORTHO05D007319 3.0e-24 115.2 79 63.3
Atru.ctg114.13 Acer truncatum HOM05D006052 ORTHO05D007319 6.7e-24 114.0 66 77.3
MD09G1206900 Malus domestica HOM05D006052 ORTHO05D007319 2.5e-23 112.1 91 63.7
AagrBONN_evm.TU.Sc2ySwM_344.4288 Anthoceros agrestis HOM05D006052 ORTHO05D007319 3.3e-23 111.7 87 59.8
RcHm_v2.0_Chr5g0082611 Rosa chinensis HOM05D006052 ORTHO05D007319 7.4e-23 110.5 63 76.2
CBR_g27938 Chara braunii HOM05D006052 ORTHO05D007319 8.2e-22 107.1 96 52.1
RcHm_v2.0_Chr5g0082321 Rosa chinensis HOM05D006052 ORTHO05D007319 1.8e-21 105.9 63 74.6
Nitab4.5_0001315g0290 Nicotiana tabacum HOM05D006052 ORTHO05D007319 3.1e-21 105.1 87 62.1
RcHm_v2.0_Chr4g0404221 Rosa chinensis HOM05D006052 ORTHO05D007319 3.1e-21 105.1 62 75.8
Nitab4.5_0008606g0020 Nicotiana tabacum HOM05D006052 ORTHO05D007319 9.1e-21 103.6 53 83.0
BraA02t06670Z Brassica rapa HOM05D006052 ORTHO05D007319 7.7e-20 100.5 63 68.3
A02p16100 Brassica napus HOM05D006052 ORTHO05D007319 2.2e-19 99.0 64 67.2
Manes.11G036000 Manihot esculenta HOM05D006052 ORTHO05D007319 2.9e-19 98.6 65 76.9
MELO3C024266.2 Cucumis melo HOM05D006052 ORTHO05D007319 8.5e-19 97.1 59 74.6
Lsat_1_v5_gn_1_34740 Lactuca sativa HOM05D006052 ORTHO05D007319 3.0e-16 88.6 68 67.6
vmacro16174 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 1.5e-15 86.3 61 72.1
MCO15G075 Micromonas commoda HOM05D006052 ORTHO05D007319 7.4e-15 84.0 83 49.4
Cre10.g454550 Chlamydomonas reinhardtii HOM05D006052 ORTHO05D007319 2.2e-14 82.4 73 52.1
Sp2g00570 Schrenkiella parvula HOM05D006052 ORTHO05D007319 8.2e-14 80.5 61 65.6
Nn2g12137 Nelumbo nucifera HOM05D006052 ORTHO05D007319 1.1e-13 80.1 49 73.5
PRCOL_00001792 Prasinoderma coloniale HOM05D006052 ORTHO05D007319 5.3e-13 77.8 74 48.6
Cfa026674 Carpinus fangiana HOM05D006052 ORTHO05D007319 7.0e-13 77.4 80 52.5
TPR.G20406 Trifolium pratense HOM05D006052 ORTHO05D007319 6.5e-11 70.9 33 87.9
CBR_g29697 Chara braunii HOM05D035488 ORTHO05D007319 4.4e-07 58.2 69 39.1


User provided reference genes

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