Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0348 Punica granatum HOM05D013157 ORTHO05D017001 1.3e-69 266.2 126 100.0
PGR102G1701 Punica granatum HOM05D013157 ORTHO05D017001 1.3e-69 266.2 126 100.0
PGR102G2497 Punica granatum HOM05D013157 ORTHO05D017001 1.3e-69 266.2 126 100.0
PGR102G1570 Punica granatum HOM05D013157 ORTHO05D017001 1.2e-62 243.0 127 90.6
PGR102G0729 Punica granatum HOM05D013157 ORTHO05D017001 6.4e-32 141.0 127 54.3
PGR102G0135 Punica granatum HOM05D013157 ORTHO05D017001 5.1e-29 131.3 127 52.0
PGR102G0025 Punica granatum HOM05D013157 ORTHO05D017001 1.1e-28 130.2 117 53.8
PGR083G0265 Punica granatum HOM05D013157 ORTHO05D017001 2.2e-16 89.4 117 38.5
Eucgr.B01478 Eucalyptus grandis HOM05D013157 ORTHO05D017001 2.1e-11 72.8 121 34.7
PGR083G2896 Punica granatum HOM05D013157 ORTHO05D017001 2.9e-08 62.4 124 29.8
TWI38G0181 Tripterygium wilfordii HOM05D013157 ORTHO05D000988 8.4e-08 60.8 53 45.3
Phvul.001G071800 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 4.2e-07 58.5 126 29.4
TWI38G0377 Tripterygium wilfordii HOM05D013157 ORTHO05D051485 5.5e-07 58.2 53 41.5
VMungo0647G1641 Vigna mungo HOM05D008402 ORTHO05D000988 5.5e-07 58.2 60 43.3
BcaC06g31522 Brassica carinata HOM05D001614 ORTHO05D000988 1.6e-06 56.6 77 35.1
BcaC06g31523 Brassica carinata HOM05D001614 ORTHO05D000988 1.6e-06 56.6 83 32.5
PGR031G1959 Punica granatum HOM05D007923 ORTHO05D009651 1.6e-06 56.6 118 33.9
VMungo0647G0396 Vigna mungo HOM05D008402 ORTHO05D000988 1.6e-06 56.6 52 42.3
VMungo0647G2588 Vigna mungo HOM05D008402 ORTHO05D000988 2.1e-06 56.2 124 27.4
BcaC06g31524 Brassica carinata HOM05D001614 ORTHO05D000988 2.7e-06 55.8 77 35.1
AT1G45215 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 4.6e-06 55.1 51 39.2
AT1G45221 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 4.6e-06 55.1 51 39.2
BraA06t27516Z Brassica rapa HOM05D001614 ORTHO05D000988 4.6e-06 55.1 77 33.8
BraA06t27509Z Brassica rapa HOM05D001614 ORTHO05D000988 6.0e-06 54.7 77 35.1
Phvul.001G071700 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 6.0e-06 54.7 59 40.7
BcaB03g15284 Brassica carinata HOM05D001614 ORTHO05D000988 7.9e-06 54.3 77 33.8
BraA06t27510Z Brassica rapa HOM05D001614 ORTHO05D000988 7.9e-06 54.3 77 33.8
BraA06t27514Z Brassica rapa HOM05D001614 ORTHO05D000988 7.9e-06 54.3 77 33.8
Dinv34528 Davidia involucrata HOM05D008521 ORTHO05D012225 7.9e-06 54.3 51 47.1
Medtr8g011760 Medicago truncatula HOM05D008402 ORTHO05D000988 7.9e-06 54.3 63 39.7
RcHm_v2.0_Chr5g0046951 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0046961 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0046971 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051281 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051291 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051301 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051311 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051321 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051331 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051341 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051391 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051411 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0051421 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0053391 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0053401 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8
RcHm_v2.0_Chr5g0053411 Rosa chinensis HOM05D008521 ORTHO05D000988 7.9e-06 54.3 49 40.8


User provided reference genes

Program Settings