Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 1.5e-147 526.2 271 100.0
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 2.1e-96 356.3 273 68.1
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 6.1e-96 354.8 271 63.8
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.1e-94 350.5 271 64.6
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 3.7e-93 345.5 271 62.7
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 1.8e-92 343.2 250 66.8
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 4.1e-92 342.0 272 63.2
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 9.1e-92 340.9 271 62.7
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.0e-91 339.7 269 65.8
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 2.6e-91 339.3 271 63.8
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 2.6e-91 339.3 271 62.7
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 2.6e-91 339.3 274 63.9
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 5.9e-91 338.2 271 62.4
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 2.5e-89 332.8 272 64.0
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 3.0e-87 325.9 271 61.6
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 3.0e-87 325.9 271 61.6
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.5e-86 323.6 273 60.4
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.0e-86 323.2 273 61.2
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 2.0e-86 323.2 272 61.0
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 2.0e-86 323.2 254 63.8
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 3.3e-86 322.4 271 61.6
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 4.8e-85 318.5 242 66.1
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 7.0e-84 314.7 272 59.2
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.5e-83 313.5 238 65.1
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 2.6e-83 312.8 251 62.5
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 2.2e-82 309.7 272 62.9
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 5.0e-82 308.5 271 58.3
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 8.5e-82 307.8 271 58.7
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.5e-81 306.2 271 60.5
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 2.5e-81 306.2 271 58.7
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.5e-81 306.2 272 59.6
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 2.5e-81 306.2 276 59.8
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 3.2e-81 305.8 271 59.4
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 9.4e-81 304.3 271 59.0
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.1e-80 303.1 238 64.3
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 4.7e-80 302.0 251 61.0
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 6.1e-80 301.6 273 57.5
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.8e-79 300.1 272 58.5
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.0e-79 299.3 272 58.1
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 6.7e-79 298.1 271 58.3
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.1e-78 297.4 272 57.0
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.5e-78 297.0 272 58.1
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 2.0e-78 296.6 272 59.6
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 2.6e-78 296.2 271 56.8
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 4.4e-78 295.4 241 62.2
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 5.7e-78 295.0 275 57.8
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 7.4e-78 294.7 271 56.5
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 9.7e-78 294.3 271 55.4
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.2e-77 293.1 276 56.5
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 3.7e-77 292.4 252 57.5
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 8.2e-77 291.2 274 55.5
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 8.2e-77 291.2 271 55.4
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 8.2e-77 291.2 271 56.1
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.4e-76 290.4 271 55.4
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.8e-76 290.0 274 55.5
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 9.1e-76 287.7 274 55.8
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.6e-75 287.0 275 56.0
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 2.6e-75 286.2 274 56.6
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 3.5e-75 285.8 276 57.6
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 3.5e-75 285.8 276 57.6
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 3.5e-75 285.8 274 55.1
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 4.5e-75 285.4 276 58.0
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 4.5e-75 285.4 271 55.0
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 4.5e-75 285.4 271 55.0
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 5.9e-75 285.0 271 56.1
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 7.7e-75 284.6 276 58.0
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.0e-74 284.3 273 58.2
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.3e-74 283.9 274 55.8
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.3e-74 283.9 278 56.8
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.3e-74 283.9 278 56.8
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.7e-74 283.5 243 59.3
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 5.0e-74 282.0 282 58.2
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 1.5e-73 280.4 280 57.1
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 3.2e-73 279.3 251 60.2
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 6.1e-72 275.0 244 57.8
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 8.0e-72 274.6 274 56.9
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.6e-67 260.4 241 56.0
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 2.0e-67 260.0 218 59.6
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 8.5e-66 254.6 277 52.3
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 1.1e-65 254.2 241 55.2
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 4.2e-65 252.3 280 52.1
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 7.2e-65 251.5 273 52.0
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 2.1e-64 250.0 214 59.3
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.4e-63 247.3 277 52.0
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 4.0e-63 245.7 199 62.3
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 8.3e-61 238.0 271 50.2
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 2.9e-58 229.6 272 50.4
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.9e-57 226.9 270 48.5
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 2.5e-57 226.5 269 47.2
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 8.0e-56 221.5 273 49.8
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.6e-54 216.5 239 51.5
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 1.3e-53 214.2 269 46.5
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-52 210.3 271 45.4
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-52 210.3 271 45.4
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 1.0e-50 204.5 258 45.3
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 3.8e-50 202.6 271 46.1
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.5e-49 200.7 251 48.2
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.3e-49 199.5 273 42.9
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 2.8e-48 196.4 245 47.3
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 4.7e-48 195.7 272 43.8
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 3.0e-47 193.0 247 45.7
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 9.8e-46 188.0 272 43.8
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.2e-44 183.0 161 59.6
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 6.0e-43 178.7 244 44.7
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 2.3e-39 166.8 200 45.0
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 3.1e-39 166.4 200 44.5
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 1.7e-34 150.6 239 37.7
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 3.4e-30 136.3 250 37.2
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 2.2e-29 133.7 244 36.5
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.7e-27 126.7 88 72.7
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 2.3e-26 123.6 244 36.5
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 4.3e-25 119.4 224 38.8
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 3.6e-24 116.3 157 42.0
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 2.6e-22 110.2 220 37.3
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 6.4e-21 105.5 122 50.0
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 5.4e-20 102.4 88 56.8
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 7.1e-20 102.1 111 50.5
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 8.1e-16 88.6 104 43.3
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 5.8e-14 82.4 181 34.3
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.3e-08 64.7 57 50.9
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 2.1e-08 63.9 41 75.6
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 4.5e-06 56.2 63 50.8


User provided reference genes

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