Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 3.3e-77 291.6 142 100.0
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 4.3e-61 238.0 142 79.6
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 5.7e-61 237.7 142 78.9
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 1.2e-58 229.9 141 75.9
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 1.5e-58 229.6 139 78.4
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.5e-58 228.0 140 78.6
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.5e-58 228.0 140 78.6
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 7.6e-58 227.3 139 76.3
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 2.2e-57 225.7 140 78.6
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 2.9e-57 225.3 142 76.1
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 5.0e-57 224.6 142 76.8
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.5e-57 224.2 140 77.1
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 6.5e-57 224.2 139 76.3
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 2.5e-56 222.2 138 75.4
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 3.2e-56 221.9 139 75.5
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 4.2e-56 221.5 142 75.4
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 4.2e-56 221.5 138 76.8
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 9.3e-56 220.3 136 76.5
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 1.2e-55 219.9 142 75.4
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.1e-55 219.2 141 75.2
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.1e-55 219.2 141 75.2
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 2.1e-55 219.2 143 75.5
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 2.7e-55 218.8 143 72.7
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 3.6e-55 218.4 139 73.4
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 73.7
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 1.8e-54 216.1 143 71.3
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 1.8e-54 216.1 136 74.3
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 3.9e-54 214.9 141 70.9
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 5.1e-54 214.5 139 74.1
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 1.1e-53 213.4 139 73.4
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 1.1e-53 213.4 137 73.7
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.1e-53 213.4 143 72.0
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 1.1e-53 213.4 140 73.6
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.5e-53 213.0 137 72.3
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 1.5e-53 213.0 139 71.2
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.5e-53 212.2 141 73.0
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 3.3e-53 211.8 136 73.5
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 5.7e-53 211.1 136 74.3
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 7.4e-53 210.7 136 72.1
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 9.7e-53 210.3 137 73.0
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 9.7e-53 210.3 141 72.3
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 9.7e-53 210.3 139 69.8
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.3e-52 209.9 139 71.9
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 1.3e-52 209.9 139 69.1
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.6e-52 209.5 142 68.3
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 1.6e-52 209.5 135 73.3
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 2.2e-52 209.1 138 71.7
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 2.2e-52 209.1 143 70.6
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 2.8e-52 208.8 136 73.5
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 3.7e-52 208.4 134 73.9
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 3.7e-52 208.4 136 72.8
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 4.8e-52 208.0 135 71.9
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 6.3e-52 207.6 139 70.5
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 6.3e-52 207.6 136 73.5
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 6.3e-52 207.6 136 69.9
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 8.2e-52 207.2 137 73.7
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 8.2e-52 207.2 139 71.9
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 1.1e-51 206.8 135 69.6
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.4e-51 206.5 137 73.0
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.8e-51 206.1 137 72.3
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 1.8e-51 206.1 139 70.5
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 3.1e-51 205.3 137 71.5
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 3.1e-51 205.3 143 69.9
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 3.1e-51 205.3 132 72.0
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 4.1e-51 204.9 142 66.2
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 6.9e-51 204.1 137 73.0
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 6.9e-51 204.1 137 73.0
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 6.9e-51 204.1 137 73.0
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 6.9e-51 204.1 137 73.0
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 6.9e-51 204.1 137 73.0
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 9.1e-51 203.8 136 71.3
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 1.2e-50 203.4 137 71.5
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 1.2e-50 203.4 137 73.0
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 1.2e-50 203.4 142 66.2
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.5e-50 203.0 137 71.5
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 2.0e-50 202.6 136 70.6
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 4.5e-50 201.4 141 70.9
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.5e-50 201.4 143 65.7
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 5.9e-50 201.1 138 71.7
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 5.9e-50 201.1 138 71.7
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 7.7e-50 200.7 138 71.7
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.3e-49 199.9 143 65.0
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.2e-49 199.1 135 69.6
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 2.9e-49 198.7 135 70.4
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 3.8e-49 198.4 128 74.2
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 3.8e-49 198.4 136 69.9
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 6.5e-49 197.6 135 67.4
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 8.5e-49 197.2 136 70.6
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 2.5e-48 195.7 138 71.7
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 2.7e-47 192.2 142 65.5
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 7.9e-47 190.7 138 65.9
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.4e-46 189.9 143 61.5
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 6.7e-46 187.6 142 67.6
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 9.7e-45 183.7 131 67.9
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 6.5e-41 171.0 131 61.8
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.4e-40 169.9 162 56.2
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 1.2e-39 166.8 114 71.1
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.8e-38 162.9 128 60.2
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 3.0e-38 162.2 132 56.1
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 3.3e-37 158.7 140 62.9
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.8e-36 155.6 131 62.6
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.7e-36 155.2 157 55.4
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.4e-35 153.3 95 73.7
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 1.8e-35 152.9 142 57.0
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 3.1e-35 152.1 136 56.6
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 4.5e-34 148.3 101 70.3
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.2e-33 146.0 140 60.0
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 3.8e-33 145.2 96 69.8
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 9.4e-32 140.6 135 55.6
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.2e-31 140.2 99 67.7
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 2.1e-31 139.4 96 72.9
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 2.6e-29 132.5 99 60.6
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 2.1e-23 112.8 96 57.3
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.8e-22 109.8 129 46.5
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 4.4e-21 105.1 139 43.9
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 9.8e-21 104.0 140 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 2.8e-20 102.4 90 54.4
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 5.4e-19 98.2 62 74.2
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 1.2e-18 97.1 117 45.3
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 1.0e-17 94.0 126 40.5
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.3e-17 93.6 62 69.4
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 4.0e-14 82.0 46 82.6
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 7.5e-13 77.8 60 63.3
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 8.3e-12 74.3 44 75.0
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 1.7e-09 66.6 37 75.7
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 3.8e-09 65.5 42 78.6
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.5e-08 63.5 48 58.3
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 2.5e-08 62.8 53 49.1


User provided reference genes

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