Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 3.6e-158 561.6 302 100.0
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 3.0e-96 355.9 253 65.6
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 1.2e-95 354.0 253 68.4
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 2.6e-95 352.8 253 67.6
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 5.7e-95 351.7 253 67.2
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 9.8e-95 350.9 253 67.6
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 1.7e-94 350.1 253 64.8
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 1.7e-94 350.1 254 63.4
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 3.7e-94 349.0 307 58.3
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 3.1e-93 345.9 253 66.0
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 5.4e-93 345.1 253 66.8
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 9.1e-93 344.4 255 65.1
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 1.7e-91 340.1 254 64.6
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.5e-90 337.0 253 66.8
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 1.5e-90 337.0 255 62.4
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 1.9e-90 336.7 255 65.1
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 3.2e-90 335.9 254 61.4
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 3.2e-90 335.9 253 62.5
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 3.2e-90 335.9 252 66.7
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 5.5e-90 335.1 253 61.3
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 9.4e-90 334.3 253 61.7
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 8.0e-89 331.3 255 62.4
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.4e-88 330.5 256 61.7
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.8e-88 330.1 253 62.1
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 2.3e-88 329.7 253 62.1
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 2.3e-88 329.7 253 62.1
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 2.3e-88 329.7 253 64.4
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 6.8e-88 328.2 263 60.8
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.2e-87 327.4 254 62.6
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.2e-87 327.4 254 62.6
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 1.5e-87 327.0 253 62.5
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 7.5e-87 324.7 253 63.6
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 7.5e-87 324.7 253 62.8
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 7.5e-87 324.7 253 60.1
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 1.3e-86 323.9 254 62.6
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 1.3e-86 323.9 254 62.6
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 2.8e-86 322.8 254 62.2
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 2.8e-86 322.8 254 61.8
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 4.9e-86 322.0 254 61.8
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 6.3e-86 321.6 255 61.2
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 6.3e-86 321.6 255 61.2
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 8.3e-86 321.2 254 60.6
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 1.1e-85 320.9 254 60.6
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 5.4e-85 318.5 257 63.8
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 9.1e-85 317.8 253 57.7
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 1.2e-84 317.4 254 60.2
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 1.6e-84 317.0 255 60.4
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 2.7e-84 316.2 255 60.0
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 3.5e-84 315.8 253 57.7
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 7.7e-84 314.7 253 57.3
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 7.7e-84 314.7 254 59.4
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 7.7e-84 314.7 254 59.8
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.0e-83 314.3 253 56.9
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 1.7e-83 313.5 254 60.2
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 2.3e-83 313.2 263 58.9
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 2.3e-83 313.2 243 60.1
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 2.3e-83 313.2 249 62.7
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 6.6e-83 311.6 254 60.6
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 8.6e-83 311.2 260 58.8
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 8.6e-83 311.2 257 61.1
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-82 310.8 257 61.1
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.9e-82 310.1 253 57.3
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 1.9e-82 310.1 253 60.1
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.2e-81 307.4 256 59.8
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 2.1e-81 306.6 253 56.9
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 2.8e-81 306.2 254 60.2
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 3.6e-81 305.8 255 59.2
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 1.4e-80 303.9 251 59.8
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 1.4e-80 303.9 258 58.9
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 1.4e-80 303.9 254 59.4
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 2.3e-80 303.1 222 66.7
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 2.3e-80 303.1 241 63.1
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 4.0e-80 302.4 256 60.5
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 4.0e-80 302.4 254 59.1
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 6.8e-80 301.6 253 57.7
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 8.9e-80 301.2 255 60.0
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 8.9e-80 301.2 254 59.8
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 4.4e-79 298.9 256 58.2
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 7.5e-79 298.1 251 59.0
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 7.5e-79 298.1 241 59.8
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.4e-77 293.9 252 58.7
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 1.4e-77 293.9 250 57.2
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 1.2e-76 290.8 251 56.6
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 4.6e-76 288.9 252 52.8
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 4.6e-76 288.9 254 55.9
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 2.9e-75 286.2 255 55.3
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 5.0e-75 285.4 255 55.7
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 2.5e-74 283.1 256 57.8
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.2e-73 280.8 263 55.1
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 1.6e-73 280.4 304 49.0
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 6.8e-72 275.0 253 52.2
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.5e-71 273.9 254 52.0
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 2.0e-71 273.5 254 52.0
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 3.2e-69 266.2 260 52.7
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 2.0e-68 263.5 253 54.5
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 1.7e-67 260.4 204 61.8
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 1.7e-67 260.4 224 55.8
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 3.3e-66 256.1 254 52.0
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 7.3e-66 255.0 227 56.4
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 4.7e-65 252.3 249 52.6
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 6.2e-65 251.9 248 53.6
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 2.6e-63 246.5 245 49.8
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.2e-60 237.7 222 54.1
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.2e-60 237.7 222 54.1
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.7e-60 236.5 318 39.9
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 7.3e-58 228.4 282 41.5
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.1e-57 226.9 219 53.0
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 2.1e-57 226.9 248 48.8
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 4.7e-57 225.7 256 45.3
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.8e-56 223.8 253 45.8
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.3e-56 223.4 219 52.5
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 3.4e-55 219.5 254 46.1
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.6e-55 218.4 222 50.0
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 2.9e-54 216.5 180 58.3
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.9e-50 203.8 201 52.2
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.9e-50 203.8 253 44.7
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 3.3e-50 203.0 209 50.7
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 3.6e-49 199.5 191 50.8
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 6.4e-46 188.7 265 39.2
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 2.7e-44 183.3 249 39.0
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 3.3e-42 176.4 123 63.4
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 5.8e-39 165.6 133 60.9
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 9.9e-39 164.9 137 62.0
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 3.5e-36 156.4 279 34.1
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 7.9e-36 155.2 409 28.9
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 4.3e-34 149.4 149 53.0
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 2.8e-33 146.7 357 30.5
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 1.8e-32 144.1 126 60.3
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 4.2e-29 132.9 149 47.0
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 1.0e-27 128.3 295 29.5
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 1.1e-26 124.8 370 27.0
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 5.6e-26 122.5 76 68.4
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 5.5e-21 105.9 147 42.9
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 7.9e-20 102.1 169 39.1
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 2.3e-19 100.5 147 40.1
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 6.7e-19 99.0 140 43.6
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 4.3e-18 96.3 198 34.3
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.1e-17 94.0 51 78.4
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 2.4e-16 90.5 56 73.2
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 5.3e-16 89.4 42 83.3
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.2e-14 84.0 42 83.3
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.6e-12 76.3 99 44.4
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 9.0e-08 62.0 38 68.4
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 9.0e-08 62.0 38 68.4
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.9e-07 59.3 29 86.2
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 6.5e-06 55.8 32 68.8


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