Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 5.0e-171 604.4 306 100.0
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 5.0e-171 604.4 306 100.0
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 2.7e-132 475.7 242 100.0
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 9.8e-119 430.6 242 87.6
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 1.2e-116 423.7 242 86.4
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 2.0e-116 422.9 242 86.4
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 6.0e-116 421.4 241 85.9
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 6.0e-116 421.4 242 85.1
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 3.0e-115 419.1 242 83.9
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 3.9e-115 418.7 244 85.2
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 6.6e-115 417.9 242 85.5
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 8.6e-115 417.5 244 84.0
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 4.3e-114 415.2 242 84.7
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 9.5e-114 414.1 244 83.2
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 9.5e-114 414.1 244 83.2
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 1.2e-113 413.7 242 84.7
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 1.6e-113 413.3 242 83.5
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 1.6e-113 413.3 242 83.9
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 1.6e-113 413.3 242 84.3
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 2.1e-113 412.9 242 82.6
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 2.8e-113 412.5 242 83.9
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 6.2e-113 411.4 244 82.8
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 8.0e-113 411.0 242 83.9
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 1.1e-112 410.6 242 83.5
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 1.4e-112 410.2 244 82.8
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 1.8e-112 409.8 242 82.6
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 1.8e-112 409.8 242 83.1
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 2.3e-112 409.5 242 83.9
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 2.3e-112 409.5 242 82.6
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 5.2e-112 408.3 244 81.6
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 8.9e-112 407.5 242 83.5
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 1.2e-111 407.1 242 82.2
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 1.5e-111 406.8 242 81.8
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 2.0e-111 406.4 244 82.4
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 2.6e-111 406.0 242 82.6
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.6e-111 406.0 243 81.1
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.6e-111 406.0 243 81.5
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 2.6e-111 406.0 242 82.2
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 4.4e-111 405.2 242 81.4
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 7.5e-111 404.4 242 82.2
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.3e-110 403.7 242 81.4
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 1.7e-110 403.3 242 80.6
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.9e-110 402.5 243 80.7
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 2.9e-110 402.5 242 80.6
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 2.9e-110 402.5 242 82.6
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 3.7e-110 402.1 242 81.0
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 3.7e-110 402.1 243 80.7
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 4.9e-110 401.7 245 82.0
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 6.4e-110 401.4 242 81.4
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 1.1e-109 400.6 242 81.4
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 1.1e-109 400.6 242 81.4
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 1.1e-109 400.6 242 83.1
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 1.4e-109 400.2 242 80.6
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 5.4e-109 398.3 242 80.2
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 5.4e-109 398.3 271 75.3
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 7.0e-109 397.9 243 81.9
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 7.0e-109 397.9 242 80.6
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 7.0e-109 397.9 242 81.0
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 7.0e-109 397.9 242 81.0
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 7.0e-109 397.9 242 81.0
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 7.0e-109 397.9 242 81.0
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 1.2e-108 397.1 242 79.8
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 1.2e-108 397.1 242 79.8
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 1.6e-108 396.7 242 81.8
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 2.1e-108 396.4 242 81.0
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 2.1e-108 396.4 242 81.0
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 2.1e-108 396.4 242 79.8
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 2.7e-108 396.0 242 80.2
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 3.5e-108 395.6 242 80.2
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 4.6e-108 395.2 242 80.2
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 4.6e-108 395.2 242 79.8
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 4.6e-108 395.2 242 79.8
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 4.6e-108 395.2 242 79.8
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 4.6e-108 395.2 242 79.8
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 4.6e-108 395.2 242 79.8
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 4.6e-108 395.2 242 80.6
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 6.0e-108 394.8 242 79.8
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 6.0e-108 394.8 242 79.8
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 6.0e-108 394.8 242 78.9
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 7.8e-108 394.4 242 79.8
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 1.7e-107 393.3 242 79.3
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 2.3e-107 392.9 242 80.2
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 2.3e-107 392.9 242 79.8
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 2.3e-107 392.9 261 77.4
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 3.9e-107 392.1 242 79.8
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 3.9e-107 392.1 242 79.3
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 5.1e-107 391.7 242 80.6
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 5.1e-107 391.7 242 79.8
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 6.6e-107 391.3 246 78.9
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 1.1e-106 390.6 242 81.0
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 1.9e-106 389.8 242 78.5
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 1.9e-106 389.8 242 78.5
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 1.9e-106 389.8 242 78.5
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 8.1e-105 384.4 256 75.4
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 2.6e-103 379.4 237 79.3
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 4.4e-103 378.6 250 75.2
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 1.2e-100 370.5 296 66.9
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 1.7e-99 366.7 232 77.2
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 3.9e-99 365.5 323 61.9
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 3.9e-99 365.5 242 74.0
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 3.3e-98 362.5 242 73.1
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 6.2e-97 358.2 242 75.2
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 1.1e-96 357.5 255 71.0
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 1.4e-96 357.1 212 83.5
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 4.4e-95 352.1 204 82.8
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 1.4e-93 347.1 217 79.7
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 2.4e-93 346.3 270 67.4
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 2.4e-93 346.3 195 86.2
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 3.3e-90 335.9 192 85.4
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 4.0e-88 328.9 204 76.5
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 2.0e-87 326.6 226 74.8
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 1.3e-86 323.9 179 87.2
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 2.4e-85 319.7 234 69.2
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 7.1e-85 318.2 183 83.1
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 7.1e-85 318.2 203 73.9
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 4.6e-84 315.5 240 69.6
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 3.1e-80 302.8 245 64.1
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 3.5e-76 289.3 159 85.5
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 2.5e-69 266.5 163 78.5
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 5.7e-66 255.4 153 77.8
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 4.8e-65 252.3 242 55.8
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 2.6e-63 246.5 143 84.6
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 2.5e-61 240.0 157 72.0
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 1.2e-60 237.7 180 71.1
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.0e-59 234.6 143 83.2
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 1.1e-58 231.1 243 48.6
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.9e-58 230.3 143 81.1
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 4.1e-56 222.6 134 82.8
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.2e-54 216.9 128 85.2
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 1.2e-52 211.1 181 62.4
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-38 162.5 191 47.1
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.4e-34 149.4 88 84.1
BcaNung05691 Brassica carinata HOM05D004776 ORTHO05D005777 1.3e-30 137.9 92 72.8
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.9e-30 136.7 92 73.9
Cpa.g.sc1.24 Carica papaya HOM05D004776 ORTHO05D005777 4.2e-29 132.9 88 76.1
Hund01475 Selenicereus undatus HOM05D004776 ORTHO05D005777 1.8e-27 127.5 86 74.4
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 5.2e-27 125.9 257 34.6
AagrBONN_evm.TU.Sc2ySwM_228.5408 Anthoceros agrestis HOM05D004776 ORTHO05D005777 6.8e-27 125.6 114 49.1
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 1.7e-22 110.9 132 48.5
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 3.8e-22 109.8 254 31.5
MD00G1033900 Malus domestica HOM05D004776 ORTHO05D005777 9.4e-21 105.1 71 70.4
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 9.8e-18 95.1 276 30.4
Atru.chr3.3553 Acer truncatum HOM05D004776 ORTHO05D005777 1.7e-17 94.4 58 75.9
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 5.4e-16 89.4 52 82.7
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 2.0e-15 87.4 45 88.9
PRCOL_00000088 Prasinoderma coloniale HOM05D004776 ORTHO05D005777 3.7e-09 66.6 200 29.5


User provided reference genes

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