Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR084G0007 Punica granatum HOM05D000984 ORTHO05D336789 1.6e-64 249.2 120 100.0
PGR142G1463 Punica granatum HOM05D000984 ORTHO05D336941 1.6e-64 249.2 120 100.0
GSVIVG01021058001 Vitis vinifera HOM05D000984 ORTHO05D001096 1.9e-09 66.2 88 34.1
PSO541G3064 Papaver somniferum HOM05D000984 ORTHO05D001096 8.0e-08 60.8 100 29.0
PSO675G3241 Papaver somniferum HOM05D000984 ORTHO05D001096 8.0e-08 60.8 100 29.0
CAN.G1493.2 Capsicum annuum HOM05D000984 ORTHO05D001096 1.8e-07 59.7 88 35.2
Os01g0918300 Oryza sativa ssp. japonica HOM05D000984 ORTHO05D001096 1.8e-07 59.7 87 32.2
Solyc07g049360.3 Solanum lycopersicum HOM05D000984 ORTHO05D001096 1.8e-07 59.7 88 35.2
Sopen07g024700 Solanum pennellii HOM05D000984 ORTHO05D001096 1.8e-07 59.7 88 35.2
C01p23020 Brassica napus HOM05D000984 ORTHO05D001096 2.3e-07 59.3 88 31.8
PGSC0003DMG400000665 Solanum tuberosum HOM05D000984 ORTHO05D001096 2.3e-07 59.3 88 34.1
PGR044G0632 Punica granatum HOM05D000984 ORTHO05D001096 3.0e-07 58.9 84 35.7
SEGI_32515 Sequoiadendron giganteum HOM05D000984 ORTHO05D001096 4.0e-07 58.5 88 31.8
Sp6g17100 Schrenkiella parvula HOM05D000984 ORTHO05D001096 5.2e-07 58.2 87 31.0
HPP92_013627 Vanilla planifolia HOM05D000984 ORTHO05D001096 5.2e-07 58.2 87 31.0
PSO210G7007 Papaver somniferum HOM05D000984 ORTHO05D001096 6.8e-07 57.8 87 31.0
PSO832G1348 Papaver somniferum HOM05D000984 ORTHO05D001096 6.8e-07 57.8 87 31.0
Zm00001eb364660 Zea mays HOM05D000984 ORTHO05D001096 6.8e-07 57.8 87 32.2
Zm00001eb364680 Zea mays HOM05D000984 ORTHO05D001096 6.8e-07 57.8 87 32.2
Eucgr.H00049 Eucalyptus grandis HOM05D000984 ORTHO05D001096 8.9e-07 57.4 97 32.0
Aqoxy2G00580 Aquilegia oxysepala HOM05D000984 ORTHO05D001096 1.2e-06 57.0 84 31.0
BcaB05g22187 Brassica carinata HOM05D000984 ORTHO05D001096 1.2e-06 57.0 87 34.5
BcaB05g22188 Brassica carinata HOM05D000984 ORTHO05D001096 1.2e-06 57.0 87 34.5
HanXRQChr13g0408181 Helianthus annuus HOM05D000984 ORTHO05D001096 1.5e-06 56.6 87 34.5
Sabra14G0142600 Salix brachista HOM05D000984 ORTHO05D001096 2.0e-06 56.2 89 34.8
Carub.0007s1400 Capsella rubella HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 31.0
Ca_12182_v3 Cicer arietinum L. HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 29.9
ECA240G2063 Erigeron canadensis HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 31.0
Migut.M01724 Erythranthe guttata HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 29.9
Thhalv10015094m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 29.9
Glyma.08G320500 Glycine max HOM05D000984 ORTHO05D001096 2.6e-06 55.8 88 30.7
Gorai.009G442500 Gossypium raimondii HOM05D000984 ORTHO05D001096 2.6e-06 55.8 85 34.1
Lj6g0026938 Lotus japonicus HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 29.9
Nitab4.5_0000482g0270 Nicotiana tabacum HOM05D000984 ORTHO05D001096 2.6e-06 55.8 88 33.0
Oeu026392.1 Olea europaea HOM05D000984 ORTHO05D001096 2.6e-06 55.8 88 33.0
Peaxi162Scf00921g00247 Petunia axillaris HOM05D000984 ORTHO05D001096 2.6e-06 55.8 88 33.0
Psat5g175280 Pisum sativum HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 29.9
Potri.014G190300 Populus trichocarpa HOM05D000984 ORTHO05D001096 2.6e-06 55.8 89 34.8
TPR.G32244 Trifolium pratense HOM05D000984 ORTHO05D001096 2.6e-06 55.8 87 29.9
Oeu008005.1 Olea europaea HOM05D000984 ORTHO05D001096 3.4e-06 55.5 88 33.0
PGSC0003DMG400022207 Solanum tuberosum HOM05D000984 ORTHO05D001096 3.4e-06 55.5 98 27.6
Aa31LG5G12110 Aethionema arabicum HOM05D000984 ORTHO05D001096 4.4e-06 55.1 85 31.8
SGA_v2.0_scaffold8G04348 Striga asiatica HOM05D000984 ORTHO05D001096 4.4e-06 55.1 88 35.2
Duzib170G0784 Durio zibethinus HOM05D000984 ORTHO05D001096 5.7e-06 54.7 85 32.9
Nitab4.5_0009915g0010 Nicotiana tabacum HOM05D000984 ORTHO05D001096 5.7e-06 54.7 83 28.9
Sopen07g033080 Solanum pennellii HOM05D000984 ORTHO05D001096 5.7e-06 54.7 98 27.6
Ah.06g182410 Amaranthus hybridus HOM05D000984 ORTHO05D001096 7.5e-06 54.3 87 32.2
CARHR268520 Cardamine hirsuta HOM05D000984 ORTHO05D001096 7.5e-06 54.3 85 30.6
COL.COLO4_09714 Corchorus olitorius HOM05D000984 ORTHO05D001096 7.5e-06 54.3 85 32.9
Dinv22238 Davidia involucrata HOM05D000984 ORTHO05D001096 7.5e-06 54.3 85 32.9
Duzib133G0936 Durio zibethinus HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Gohir.A04G012526 Gossypium hirsutum HOM05D000984 ORTHO05D001096 7.5e-06 54.3 85 32.9
Gohir.A07G082300 Gossypium hirsutum HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Gohir.A07G187200 Gossypium hirsutum HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Gohir.D05G373901 Gossypium hirsutum HOM05D000984 ORTHO05D001096 7.5e-06 54.3 85 32.9
Gohir.D07G088800 Gossypium hirsutum HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Gohir.D07G193700 Gossypium hirsutum HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Gorai.001G095200 Gossypium raimondii HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Nn1g07910 Nelumbo nucifera HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 31.7
Phvul.006G047600 Phaseolus vulgaris HOM05D000984 ORTHO05D001096 7.5e-06 54.3 88 29.5
Potri.002G224800 Populus trichocarpa HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Potri.014G158300 Populus trichocarpa HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
QL09p053151 Quercus lobata HOM05D000984 ORTHO05D001096 7.5e-06 54.3 87 31.0
Sabra02G0171900 Salix brachista HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Sabra14G0120300 Salix brachista HOM05D000984 ORTHO05D001096 7.5e-06 54.3 82 30.5
Solyc07g064880.4 Solanum lycopersicum HOM05D000984 ORTHO05D001096 7.5e-06 54.3 85 29.4
THA.LOC104813433 Tarenaya hassleriana HOM05D000984 ORTHO05D001096 7.5e-06 54.3 87 29.9
VMungo0540G1531 Vigna mungo HOM05D000984 ORTHO05D001096 7.5e-06 54.3 88 29.5
BcaC03g14256 Brassica carinata HOM05D000984 ORTHO05D001096 9.8e-06 53.9 87 29.9
BolC2t07737H Brassica oleracea HOM05D000984 ORTHO05D001096 9.8e-06 53.9 87 29.9
BraA02t06046Z Brassica rapa HOM05D000984 ORTHO05D001096 9.8e-06 53.9 87 29.9
CSS0034754 Camellia sinensis var. sinensis HOM05D000984 ORTHO05D001096 9.8e-06 53.9 88 29.5
Duzib268G1324 Durio zibethinus HOM05D000984 ORTHO05D001096 9.8e-06 53.9 83 33.7
Medtr3g053520 Medicago truncatula HOM05D000984 ORTHO05D001096 9.8e-06 53.9 86 29.1
Medtr3g053540 Medicago truncatula HOM05D000984 ORTHO05D001096 9.8e-06 53.9 86 29.1
TWI39G1156 Tripterygium wilfordii HOM05D000984 ORTHO05D001096 9.8e-06 53.9 85 29.4
unitig_747.g21652 Utricularia gibba HOM05D000984 ORTHO05D001096 9.8e-06 53.9 88 33.0


User provided reference genes

Program Settings