Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2830 Punica granatum HOM05D003171 ORTHO05D000921 3.4e-127 458.4 234 100.0
PGR102G2256 Punica granatum HOM05D003171 ORTHO05D000921 8.6e-123 443.7 233 97.0
PGR083G0806 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-122 440.7 233 96.6
PGR142G1110 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-122 440.7 233 96.6
PGR142G2502 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-122 440.7 233 96.6
PGR102G1426 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-121 439.9 233 96.1
PGR042G1121 Punica granatum HOM05D003171 ORTHO05D000921 8.0e-121 437.2 233 96.1
PGR031G3942 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-120 436.8 233 96.1
PGR083G2390 Punica granatum HOM05D003171 ORTHO05D000921 6.8e-120 434.1 233 96.1
PGR102G1332 Punica granatum HOM05D003171 ORTHO05D000921 7.5e-119 430.6 233 94.4
PGR102G2917 Punica granatum HOM05D003171 ORTHO05D000921 3.0e-115 418.7 233 92.3
PGR083G2107 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-114 415.6 233 91.4
PGR142G3438 Punica granatum HOM05D003171 ORTHO05D000921 5.8e-111 404.4 233 90.6
PGR119G1897 Punica granatum HOM05D003171 ORTHO05D000921 3.7e-110 401.7 224 92.9
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 1.1e-96 357.1 233 76.0
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 5.2e-96 354.8 233 76.0
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 2.0e-95 352.8 233 76.0
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 2.0e-95 352.8 233 76.0
PGR042G0219 Punica granatum HOM05D003171 ORTHO05D000921 3.4e-95 352.1 234 75.2
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 4.4e-95 351.7 233 75.5
PGR044G1317 Punica granatum HOM05D003171 ORTHO05D000921 3.3e-74 282.3 233 62.2
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 6.2e-65 251.5 231 53.7
PGR031G3747 Punica granatum HOM05D003171 ORTHO05D000921 8.1e-65 251.1 203 63.5
PGR042G2130 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-62 243.4 233 51.5
PGR119G2496 Punica granatum HOM05D003171 ORTHO05D000921 6.5e-62 241.5 233 51.1
PGR142G0886 Punica granatum HOM05D003171 ORTHO05D000921 4.2e-61 238.8 233 50.6
PGR031G1247 Punica granatum HOM05D003171 ORTHO05D000921 2.3e-51 206.5 136 75.7
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 4.5e-47 192.2 229 45.0
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 3.8e-46 189.1 229 44.5
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 5.0e-46 188.7 229 44.5
PGR102G1281 Punica granatum HOM05D003171 ORTHO05D000921 5.0e-46 188.7 229 46.3
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 1.9e-45 186.8 229 44.1
PGR102G0976 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-45 186.4 229 45.4
PGR142G2608 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-45 186.4 229 45.4
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 3.2e-45 186.0 229 44.1
PGR102G1972 Punica granatum HOM05D003171 ORTHO05D000921 7.2e-45 184.9 141 63.8
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-44 184.1 109 81.7
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-44 183.3 229 43.7
PGR042G3316 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-44 183.3 231 44.6
PGR045G0004 Punica granatum HOM05D003171 ORTHO05D000921 7.9e-44 181.4 229 44.1
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 1.8e-43 180.3 215 46.5
PGR031G1431 Punica granatum HOM05D003171 ORTHO05D000921 3.0e-43 179.5 229 44.1
PGR102G0211 Punica granatum HOM05D003171 ORTHO05D000921 5.1e-43 178.7 220 46.4
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 2.0e-42 176.8 220 44.1
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 3.3e-42 176.0 233 41.2
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 5.7e-42 175.3 232 42.2
PGR042G0711 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-40 170.6 229 40.2
PGR031G0230 Punica granatum HOM05D003171 ORTHO05D000921 4.5e-39 165.6 204 44.1
PGR031G0788 Punica granatum HOM05D003171 ORTHO05D000921 2.2e-38 163.3 229 41.9
PGR044G2193 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-38 162.9 177 48.0
PGR031G1123 Punica granatum HOM05D003171 ORTHO05D000921 8.8e-35 151.4 204 41.7
PGR119G0556 Punica granatum HOM05D003171 ORTHO05D000921 9.1e-32 141.4 224 41.5
PGR142G0920 Punica granatum HOM05D003171 ORTHO05D000921 9.1e-32 141.4 174 45.4
PGR004G1529 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-30 136.3 159 45.9
PGR119G0096 Punica granatum HOM05D003171 ORTHO05D000921 8.5e-30 134.8 174 43.1
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 3.3e-26 122.9 75 80.0
PGR004G1821 Punica granatum HOM05D003171 ORTHO05D000921 3.8e-22 109.4 117 47.0
PGR031G1928 Punica granatum HOM05D000034 ORTHO05D000037 8.0e-20 101.7 180 36.7
PGR004G1743 Punica granatum HOM05D003171 ORTHO05D000921 4.8e-17 92.4 174 36.8
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.1e-16 91.3 230 27.0
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.9e-15 85.5 113 39.8
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 5.0e-14 82.4 237 29.5
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 6.5e-14 82.0 240 29.6
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 6.5e-14 82.0 240 29.6
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.2e-12 77.8 124 34.7
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-12 77.8 229 28.8
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 4.7e-12 75.9 127 37.0
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 6.1e-12 75.5 231 28.6
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 6.1e-12 75.5 238 30.7
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 8.0e-12 75.1 237 28.3
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 8.0e-12 75.1 232 28.9
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 8.0e-12 75.1 229 28.4
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-11 74.7 229 28.4
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-11 74.7 229 28.4
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-11 74.7 229 28.4
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.4e-11 74.3 232 28.0
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 2.3e-11 73.6 156 33.3
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.3e-11 73.6 234 27.8
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 3.0e-11 73.2 113 39.8
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.0e-11 72.8 167 31.7
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 6.8e-11 72.0 86 37.2
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 1.2e-10 71.2 91 36.3
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 1.5e-10 70.9 112 40.2
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.5e-10 70.9 234 25.6
Lsat_1_v5_gn_8_44140 Lactuca sativa HOM05D003171 ORTHO05D000921 2.0e-10 70.5 87 40.2
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 2.6e-10 70.1 68 47.1
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 4.4e-10 69.3 137 32.8
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 7.5e-10 68.6 157 29.3
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 9.8e-10 68.2 72 44.4
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 9.8e-10 68.2 235 25.1
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.2e-09 67.0 151 30.5
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.2e-09 67.0 233 26.2
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.8e-09 66.6 199 27.6
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.7e-09 66.2 132 30.3
Ciclev10013577m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.9e-09 65.9 101 37.6
Ciclev10017608m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.9e-09 65.9 88 38.6
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.3e-09 65.5 108 34.3
COL.COLO4_15868 Corchorus olitorius HOM05D003171 ORTHO05D000921 1.1e-08 64.7 89 36.0
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 1.1e-08 64.7 232 26.3
CSS0041232 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.4e-08 64.3 93 34.4
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.4e-08 64.3 227 25.1
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 5.4e-08 62.4 226 27.4
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 5.4e-08 62.4 247 28.7
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 7.0e-08 62.0 239 23.4
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.2e-07 61.2 240 25.8
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-07 61.2 99 36.4
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-07 60.5 181 29.3
CSS0009593 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 7.8e-07 58.5 93 31.2
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 7.8e-07 58.5 86 38.4
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 7.8e-07 58.5 232 25.4
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 7.8e-07 58.5 232 25.4
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 1.0e-06 58.2 232 25.4
Lsat_1_v5_gn_5_73681 Lactuca sativa HOM05D003171 ORTHO05D000921 1.3e-06 57.8 229 24.9
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.3e-06 57.0 218 29.8
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.3e-06 57.0 240 22.5
CANSAT35G0983 Cannabis sativa HOM05D003171 ORTHO05D000921 2.9e-06 56.6 79 34.2
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 3.8e-06 56.2 107 32.7
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 3.8e-06 56.2 107 32.7
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 5.0e-06 55.8 186 30.1
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 6.6e-06 55.5 112 30.4
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 8.6e-06 55.1 87 35.6


User provided reference genes

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