Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 6.5e-146 520.8 275 100.0
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 2.9e-69 266.2 214 66.4
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.9e-68 263.5 218 62.8
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 1.2e-67 260.8 199 67.3
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.0e-66 257.7 201 65.2
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 1.9e-65 253.4 199 65.3
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 4.0e-63 245.7 199 64.8
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 4.0e-63 245.7 220 60.5
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.5e-62 243.8 219 61.2
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 4.4e-62 242.3 215 61.4
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 9.9e-62 241.1 192 65.1
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 1.7e-61 240.4 194 63.4
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 2.2e-61 240.0 202 62.9
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 3.8e-61 239.2 206 58.3
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 3.8e-61 239.2 227 55.9
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 8.4e-61 238.0 191 63.9
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 8.4e-61 238.0 143 77.6
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 3.2e-60 236.1 205 59.0
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 9.3e-60 234.6 201 60.2
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 1.2e-59 234.2 146 76.7
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.6e-59 233.8 226 57.5
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 1.6e-59 233.8 206 58.3
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 1.6e-59 233.8 195 61.5
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 2.1e-59 233.4 200 64.5
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.6e-59 232.3 210 61.0
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 4.6e-59 232.3 130 80.8
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 4.6e-59 232.3 130 80.8
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.0e-58 231.1 130 80.0
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.0e-58 231.1 144 76.4
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 1.0e-58 231.1 144 76.4
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.3e-58 230.7 137 77.4
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 2.3e-58 229.9 210 60.5
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 5.1e-58 228.8 206 57.3
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 6.6e-58 228.4 214 55.1
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 8.7e-58 228.0 220 55.5
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.1e-57 227.6 217 54.4
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.1e-57 227.6 146 72.6
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 1.1e-57 227.6 142 74.6
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.1e-57 227.6 209 56.5
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.5e-57 227.3 143 73.4
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.5e-57 227.3 216 54.6
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 1.5e-57 227.3 144 72.9
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 1.9e-57 226.9 210 56.2
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 1.9e-57 226.9 196 58.2
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 3.3e-57 226.1 201 56.7
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 5.6e-57 225.3 205 56.6
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 7.3e-57 224.9 241 50.2
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 7.3e-57 224.9 143 72.7
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 7.3e-57 224.9 207 59.9
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 1.6e-56 223.8 221 54.8
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 2.1e-56 223.4 203 56.2
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.8e-56 223.0 143 74.8
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 2.8e-56 223.0 199 57.8
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 4.8e-56 222.2 238 50.4
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 4.8e-56 222.2 241 50.6
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 6.2e-56 221.9 194 58.2
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 6.2e-56 221.9 191 61.8
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 8.1e-56 221.5 142 72.5
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.8e-55 220.3 241 49.8
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 1.8e-55 220.3 198 56.6
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.8e-55 220.3 217 57.6
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 3.1e-55 219.5 142 70.4
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 4.0e-55 219.2 144 71.5
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 6.9e-55 218.4 145 69.0
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 9.0e-55 218.0 218 54.6
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 1.2e-54 217.6 219 54.3
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.2e-54 217.6 131 76.3
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.2e-54 217.6 193 59.1
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 2.0e-54 216.9 147 71.4
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 2.6e-54 216.5 238 48.7
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 3.4e-54 216.1 198 57.1
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 4.5e-54 215.7 263 48.7
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 4.5e-54 215.7 217 51.6
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 7.6e-54 214.9 221 51.1
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 9.9e-54 214.5 193 57.0
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.7e-53 213.8 219 53.4
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.9e-53 213.0 143 69.9
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.4e-53 211.8 219 53.4
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 8.4e-53 211.5 145 71.7
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 1.4e-52 210.7 234 49.1
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.4e-52 210.7 213 54.0
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 3.2e-52 209.5 188 56.4
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 3.2e-52 209.5 127 74.8
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 5.5e-52 208.8 207 53.6
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 7.1e-52 208.4 142 67.6
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 7.1e-52 208.4 207 53.6
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.6e-51 207.2 121 78.5
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.5e-51 206.1 181 61.3
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.8e-50 203.8 221 50.7
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 5.1e-50 202.2 197 53.3
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 8.7e-50 201.4 145 66.2
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.5e-49 200.7 206 53.9
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.3e-49 199.5 215 54.9
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 4.3e-49 199.1 188 53.7
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.8e-48 196.4 135 67.4
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.1e-47 193.0 138 63.0
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 2.3e-42 176.8 207 43.5
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 3.0e-42 176.4 134 68.7
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.0e-42 176.4 171 54.4
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 8.2e-40 168.3 300 37.0
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.1e-39 167.9 146 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.3e-37 161.0 125 57.6
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 1.8e-31 140.6 142 44.4
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.4e-26 124.4 143 43.4
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 2.0e-25 120.6 82 74.4
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 2.5e-25 120.2 66 74.2
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 8.5e-21 105.1 80 62.5
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.1e-17 94.7 146 40.4
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.7e-16 90.9 147 36.7
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 1.4e-15 87.8 150 35.3
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 9.1e-15 85.1 106 48.1
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.7e-11 72.8 110 46.4
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 5.2e-10 69.3 107 38.3
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 5.9e-06 55.8 38 63.2


User provided reference genes

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