Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2810 Punica granatum HOM05D002846 ORTHO05D002692 3.1e-96 355.1 181 100.0
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 3.7e-17 92.4 183 41.5
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.4e-16 89.7 189 41.8
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 3.2e-16 89.4 170 42.4
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 3.2e-16 89.4 165 39.4
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 7.1e-16 88.2 171 43.3
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 2.7e-15 86.3 182 39.6
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 7.8e-15 84.7 187 39.0
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 7.8e-15 84.7 185 36.2
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 1.0e-14 84.3 182 38.5
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 1.7e-14 83.6 185 36.8
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 2.3e-14 83.2 190 37.4
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 2.3e-14 83.2 176 38.1
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 8.6e-14 81.3 188 35.1
Eucgr.F00971 Eucalyptus grandis HOM05D002846 ORTHO05D002692 8.6e-14 81.3 173 39.3
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.1e-13 80.9 176 39.2
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 1.1e-13 80.9 179 39.7
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.5e-13 80.5 191 37.7
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.5e-13 80.5 179 38.5
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 4.3e-13 79.0 175 40.6
Glyma.12G212900 Glycine max HOM05D002846 ORTHO05D002692 9.6e-13 77.8 176 36.4
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 1.6e-12 77.0 185 37.8
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 1.6e-12 77.0 187 34.8
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.6e-12 75.9 188 37.2
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.6e-12 75.9 171 39.8
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 3.6e-12 75.9 180 33.9
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 3.6e-12 75.9 183 37.7
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 3.6e-12 75.9 190 34.7
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 3.6e-12 75.9 176 38.6
Lj1A867G31 Lonicera japonica HOM05D002846 ORTHO05D002692 4.7e-12 75.5 125 40.8
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 6.2e-12 75.1 189 35.4
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 8.1e-12 74.7 169 37.9
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.1e-11 74.3 173 34.1
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.4e-11 73.9 165 34.5
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 1.8e-11 73.6 186 32.8
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.8e-11 73.6 176 35.8
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.4e-11 73.2 178 35.4
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.1e-11 72.8 171 37.4
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 5.2e-11 72.0 180 37.2
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 5.2e-11 72.0 186 36.6
DCAR_010032 Daucus carota HOM05D002846 ORTHO05D002692 6.8e-11 71.6 173 34.1
Glyma.13G288700 Glycine max HOM05D002846 ORTHO05D002692 6.8e-11 71.6 182 35.2
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 1.2e-10 70.9 176 35.8
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 1.5e-10 70.5 186 34.4
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.5e-10 70.5 171 36.3
Nn1g03606 Nelumbo nucifera HOM05D002846 ORTHO05D002692 1.5e-10 70.5 150 37.3
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 1.5e-10 70.5 180 37.8
MSTRG.14152 Avicennia marina HOM05D002846 ORTHO05D002692 2.0e-10 70.1 183 32.8
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 2.0e-10 70.1 197 32.0
Eucgr.A01716 Eucalyptus grandis HOM05D002846 ORTHO05D002692 2.0e-10 70.1 180 32.2
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 2.0e-10 70.1 159 37.7
CiPaw.11G185800 Carya illinoinensis HOM05D002846 ORTHO05D002692 2.6e-10 69.7 191 33.0
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 2.6e-10 69.7 183 31.7
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 2.6e-10 69.7 189 35.4
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 2.6e-10 69.7 179 35.2
FvH4_3g22010 Fragaria vesca HOM05D002846 ORTHO05D002692 4.4e-10 68.9 186 34.9
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 4.4e-10 68.9 186 35.5
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 5.8e-10 68.6 183 35.0
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 5.8e-10 68.6 181 32.6
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 5.8e-10 68.6 180 34.4
COL.COLO4_09606 Corchorus olitorius HOM05D002846 ORTHO05D002692 7.6e-10 68.2 135 39.3
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 7.6e-10 68.2 181 33.7
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 7.6e-10 68.2 171 35.7
SalBow1G8286 Salvia bowleyana HOM05D002846 ORTHO05D002692 7.6e-10 68.2 177 31.1
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 7.6e-10 68.2 185 35.7
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 9.9e-10 67.8 176 34.7
HanXRQChr05g0159181 Helianthus annuus HOM05D002846 ORTHO05D002692 9.9e-10 67.8 164 34.8
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 9.9e-10 67.8 186 32.8
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 1.3e-09 67.4 160 35.0
THA.LOC104808493 Tarenaya hassleriana HOM05D002846 ORTHO05D002692 1.3e-09 67.4 167 34.7
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 1.7e-09 67.0 189 34.9
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 1.7e-09 67.0 190 32.6
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 2.9e-09 66.2 171 35.1
EL10Ac4g07933 Beta vulgaris HOM05D019198 ORTHO05D002692 2.9e-09 66.2 190 31.1
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 2.9e-09 66.2 166 33.1
PGR042G0859 Punica granatum HOM05D002846 ORTHO05D002692 2.9e-09 66.2 199 31.7
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 2.9e-09 66.2 180 33.3
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.8e-09 65.9 166 33.1
MSTRG.12286 Avicennia marina HOM05D002846 ORTHO05D002692 4.9e-09 65.5 186 27.4
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 4.9e-09 65.5 169 34.9
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 4.9e-09 65.5 192 34.4
Oeu041933.1 Olea europaea HOM05D002846 ORTHO05D002692 4.9e-09 65.5 174 33.3
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 4.9e-09 65.5 192 30.2
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 6.4e-09 65.1 174 35.1
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 6.4e-09 65.1 182 33.0
BcaB04g20571 Brassica carinata HOM05D002846 ORTHO05D002692 8.4e-09 64.7 173 32.9
MBI02_g23957_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 8.4e-09 64.7 179 40.2
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 1.1e-08 64.3 174 36.8
HanXRQChr15g0496381 Helianthus annuus HOM05D002846 ORTHO05D002692 1.1e-08 64.3 191 30.9
Hma1.2p1_0249F.1_g102340 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.1e-08 64.3 185 31.9
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.4e-08 63.9 167 35.3
Nitab4.5_0003509g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.4e-08 63.9 181 34.3
Sc12g0002340 Simmondsia chinensis HOM05D002846 ORTHO05D002692 1.4e-08 63.9 199 31.7
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.4e-08 63.9 178 33.1
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 1.9e-08 63.5 193 34.2
COL.COLO4_27687 Corchorus olitorius HOM05D002846 ORTHO05D002692 2.4e-08 63.2 143 37.8
ECA246G4222 Erigeron canadensis HOM05D002846 ORTHO05D002692 2.4e-08 63.2 160 35.6
Migut.H01224 Erythranthe guttata HOM05D002846 ORTHO05D002692 2.4e-08 63.2 177 29.9
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 4.2e-08 62.4 191 31.4
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 4.2e-08 62.4 173 31.2
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 5.4e-08 62.0 180 31.7
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 5.4e-08 62.0 179 33.5
Oeu027251.1 Olea europaea HOM05D002846 ORTHO05D002692 7.1e-08 61.6 180 33.9
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 9.3e-08 61.2 168 36.3
Nitab4.5_0002229g0220 Nicotiana tabacum HOM05D002846 ORTHO05D002692 9.3e-08 61.2 131 37.4
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 9.3e-08 61.2 188 30.3
Sc01g0004150 Simmondsia chinensis HOM05D002846 ORTHO05D002692 9.3e-08 61.2 171 34.5
Phvul.005G093000 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.2e-07 60.8 174 32.8
MELO3C018090.2 Cucumis melo HOM05D002846 ORTHO05D002692 1.6e-07 60.5 172 32.6
CsaV3_3G023230 Cucumis sativus L. HOM05D002846 ORTHO05D002692 1.6e-07 60.5 176 34.1
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.6e-07 60.5 167 32.9
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.1e-07 60.1 181 33.1
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 2.7e-07 59.7 189 32.3
Manes.03G127850 Manihot esculenta HOM05D002846 ORTHO05D002692 2.7e-07 59.7 197 32.0
Sed0016321 Sechium edule HOM05D002846 ORTHO05D002692 2.7e-07 59.7 164 33.5
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 3.5e-07 59.3 189 31.2
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 3.5e-07 59.3 191 30.9
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 3.5e-07 59.3 178 36.0
Sopen05g027000 Solanum pennellii HOM05D002846 ORTHO05D002692 4.6e-07 58.9 142 32.4
Lsat_1_v5_gn_5_5060 Lactuca sativa HOM05D002846 ORTHO05D002692 6.0e-07 58.5 168 32.7
Sopen07g026090 Solanum pennellii HOM05D002846 ORTHO05D002692 6.0e-07 58.5 139 36.0
AUR62025052 Chenopodium quinoa HOM05D002846 ORTHO05D002692 7.8e-07 58.2 132 40.9
MD11G1224000 Malus domestica HOM05D002846 ORTHO05D002692 7.8e-07 58.2 168 31.5
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 1.0e-06 57.8 183 32.8
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.0e-06 57.8 184 37.0
ClCG05G014610 Citrullus lanatus HOM05D002846 ORTHO05D002692 1.3e-06 57.4 173 34.1
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 1.3e-06 57.4 194 31.4
TWI39G1011 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.3e-06 57.4 182 32.4
VMungo1080G0677 Vigna mungo HOM05D002846 ORTHO05D002692 1.3e-06 57.4 175 28.0
Solyc07g052460.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 1.7e-06 57.0 142 35.2
CiPaw.03G161600 Carya illinoinensis HOM05D002846 ORTHO05D002692 2.3e-06 56.6 135 33.3
AUR62037135 Chenopodium quinoa HOM05D002846 ORTHO05D002692 2.3e-06 56.6 171 33.9
Lj3g0014799 Lotus japonicus HOM05D002846 ORTHO05D002692 2.3e-06 56.6 195 28.7
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 2.3e-06 56.6 189 30.2
Nitab4.5_0015723g0010 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.3e-06 56.6 174 32.8
A05p27020 Brassica napus HOM05D002846 ORTHO05D002692 3.0e-06 56.2 175 32.0
BraA05t21588Z Brassica rapa HOM05D002846 ORTHO05D002692 3.0e-06 56.2 175 32.0
CiPaw.04G116900 Carya illinoinensis HOM05D002846 ORTHO05D002692 3.0e-06 56.2 171 29.8
PSO210G5289 Papaver somniferum HOM05D002846 ORTHO05D002692 3.0e-06 56.2 209 28.2
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 3.0e-06 56.2 188 30.3
CARHR097660 Cardamine hirsuta HOM05D002846 ORTHO05D002692 3.9e-06 55.8 177 30.5
Manes.12G075700 Manihot esculenta HOM05D002846 ORTHO05D002692 3.9e-06 55.8 136 36.0
Prupe.3G218700 Prunus persica HOM05D002846 ORTHO05D002692 3.9e-06 55.8 192 30.2
Atru.chr2.3239 Acer truncatum HOM05D002846 ORTHO05D002692 5.1e-06 55.5 106 38.7
MBI18_g03004_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 5.1e-06 55.5 167 31.1
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 5.1e-06 55.5 187 32.6
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 5.1e-06 55.5 185 31.4
Hund01143 Selenicereus undatus HOM05D002846 ORTHO05D002692 5.1e-06 55.5 132 37.1
BcaB06g26277 Brassica carinata HOM05D002846 ORTHO05D002692 6.6e-06 55.1 175 31.4
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 6.6e-06 55.1 179 31.8
Sp3g19720 Schrenkiella parvula HOM05D002846 ORTHO05D002692 6.6e-06 55.1 164 30.5
arahy.Tifrunner.gnm1.ann1.SQ6SJP Arachis hypogaea HOM05D002846 ORTHO05D002692 8.7e-06 54.7 101 41.6
AUR62020528 Chenopodium quinoa HOM05D002846 ORTHO05D002692 8.7e-06 54.7 197 31.5
Rhsim06G0159700 Rhododendron simsii HOM05D002846 ORTHO05D002692 8.7e-06 54.7 110 36.4
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 8.7e-06 54.7 184 33.2


User provided reference genes

Program Settings