Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 1.6e-266 922.2 448 100.0
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 3.8e-212 741.5 452 77.9
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 3.8e-212 741.5 440 80.2
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 8.5e-212 740.3 448 77.7
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 1.1e-211 740.0 446 80.0
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 3.2e-211 738.4 445 79.1
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 4.7e-210 734.6 436 80.0
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 3.9e-209 731.5 448 78.3
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 3.9e-209 731.5 444 78.6
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 5.1e-209 731.1 441 79.1
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 6.3e-207 724.2 444 77.7
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 4.1e-206 721.5 439 78.1
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 2.0e-205 719.2 437 77.6
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 3.4e-205 718.4 435 77.7
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 4.5e-205 718.0 435 77.7
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 7.7e-205 717.2 444 77.0
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 3.2e-203 711.8 419 80.0
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 9.4e-203 710.3 453 74.4
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.2e-202 709.9 432 76.4
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 3.6e-202 708.4 432 77.1
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 8.0e-202 707.2 445 77.1
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 3.9e-201 704.9 449 75.1
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 3.9e-201 704.9 443 76.5
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 2.6e-200 702.2 449 75.1
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 5.7e-200 701.0 419 78.3
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 1.3e-199 699.9 418 78.9
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 2.2e-199 699.1 453 74.6
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 2.2e-199 699.1 447 76.1
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 6.3e-199 697.6 436 76.8
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 1.4e-198 696.4 416 79.1
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.8e-198 696.0 441 76.0
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.4e-198 695.7 421 77.9
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 5.3e-198 694.5 450 74.9
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 3.5e-197 691.8 416 78.6
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 3.5e-197 691.8 416 78.6
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 7.7e-197 690.6 497 68.8
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.7e-196 689.5 417 78.4
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 2.2e-196 689.1 446 73.5
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 5.0e-196 688.0 431 77.3
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.1e-195 686.8 418 77.8
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.5e-195 686.4 456 73.5
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 2.5e-195 685.6 453 73.5
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 2.5e-195 685.6 416 78.4
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.6e-194 682.9 451 73.4
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 2.1e-194 682.6 420 76.7
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 2.7e-194 682.2 423 76.1
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 6.1e-194 681.0 417 78.2
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 8.0e-194 680.6 452 72.3
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 1.8e-193 679.5 434 74.9
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.8e-193 679.5 440 73.2
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.0e-193 678.7 466 72.3
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 3.0e-193 678.7 455 72.1
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 8.8e-193 677.2 446 71.7
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.3e-192 675.2 475 70.7
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 2.2e-191 672.5 438 73.3
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 8.2e-191 670.6 438 73.3
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 2.5e-187 659.1 436 73.4
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 3.2e-187 658.7 475 69.3
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 3.7e-183 645.2 453 70.4
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 3.7e-183 645.2 592 58.1
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.5e-179 633.3 420 72.9
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.2e-178 630.2 388 77.6
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 2.8e-178 629.0 361 80.9
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.7e-178 628.2 441 71.0
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 3.0e-177 625.5 557 59.4
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 2.0e-176 622.9 368 80.7
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.4e-174 615.9 360 80.6
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.2e-173 613.6 418 69.9
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.3e-171 605.1 442 68.3
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 2.8e-170 602.4 422 69.2
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 3.6e-170 602.1 417 71.5
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 4.7e-170 601.7 405 69.6
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 3.1e-169 599.0 406 71.9
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 9.8e-168 594.0 378 75.4
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 1.4e-166 590.1 379 73.1
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 9.2e-158 560.8 410 68.5
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 5.1e-156 555.1 375 71.2
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 4.3e-155 552.0 340 76.8
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 7.3e-155 551.2 358 74.0
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 5.4e-150 535.0 319 78.4
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 7.1e-150 534.6 384 67.7
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.3e-147 525.4 373 67.3
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 2.2e-143 513.1 424 62.3
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 1.8e-137 493.4 338 69.2
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.3e-132 476.5 284 79.2
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 7.9e-125 451.4 369 61.5
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 2.1e-117 426.8 425 51.5
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 2.7e-117 426.4 401 52.6
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 3.4e-112 409.5 314 63.7
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 8.4e-111 404.8 403 47.9
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 2.1e-109 400.2 403 51.1
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 8.5e-103 378.3 233 75.5
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 7.0e-89 332.0 223 70.4
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 7.2e-86 322.0 197 76.6
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 5.9e-80 302.4 231 63.6
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.5e-67 261.2 166 75.9
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 2.4e-65 253.8 424 38.0
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 3.1e-65 253.4 198 67.2
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 3.0e-60 236.9 402 36.1
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.8e-58 230.3 129 82.9
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.7e-47 194.5 228 46.9
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 2.4e-41 174.1 408 30.6
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 4.1e-41 173.3 88 92.0
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 7.1e-41 172.6 430 29.5
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-40 171.0 180 47.2
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 2.1e-37 161.0 125 64.0
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.5e-32 143.7 89 74.2
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 3.3e-30 137.1 114 58.8
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 1.4e-25 121.7 122 49.2
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.9e-22 111.3 72 70.8
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 2.5e-22 110.9 83 63.9
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 2.6e-19 100.9 65 72.3
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.6e-16 91.7 45 93.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 7.9e-16 89.4 72 56.9
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.0e-15 87.4 56 64.3
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 4.5e-11 73.6 53 58.5
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.9e-10 70.9 48 64.6
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 5.6e-06 56.6 35 71.4


User provided reference genes

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