Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.7e-174 615.9 320 100.0
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 4.3e-141 505.0 320 76.6
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 8.1e-140 500.7 317 77.9
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.4e-139 500.0 316 78.2
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.8e-139 499.6 317 76.7
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 8.9e-139 497.3 319 74.6
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.2e-138 496.9 319 74.3
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 2.6e-138 495.7 317 77.6
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.8e-138 494.6 319 74.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 5.8e-138 494.6 317 77.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 7.6e-138 494.2 318 74.2
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 9.2e-136 487.3 317 75.1
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 7.8e-135 484.2 316 73.1
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 2.3e-134 482.6 317 73.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.3e-134 482.6 317 75.1
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 3.9e-134 481.9 317 73.8
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 5.1e-134 481.5 318 72.6
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.1e-133 480.3 317 74.8
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.5e-133 479.9 316 73.4
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 2.5e-133 479.2 316 72.5
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 2.5e-133 479.2 314 72.0
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 3.3e-133 478.8 317 74.8
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.2e-132 476.9 317 72.9
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.6e-132 476.5 318 73.6
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.6e-132 476.5 317 72.9
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 8.1e-132 474.2 317 71.0
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.4e-131 473.4 320 74.1
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 4.0e-131 471.9 317 72.9
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.0e-131 471.9 319 72.7
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 8.9e-131 470.7 323 70.9
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.2e-130 470.3 317 71.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.3e-129 466.8 315 72.4
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.7e-129 466.5 315 72.7
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.7e-129 466.5 315 71.7
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 8.4e-129 464.2 319 69.9
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.2e-128 462.2 315 70.2
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 3.2e-128 462.2 319 69.3
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 4.2e-128 461.8 315 70.2
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 9.3e-128 460.7 315 69.8
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 1.2e-127 460.3 308 70.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 2.7e-127 459.1 320 69.1
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 2.7e-127 459.1 320 69.7
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.6e-127 458.4 305 72.8
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.0e-126 457.2 313 69.6
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.0e-126 457.2 313 69.6
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-126 457.2 305 72.8
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.3e-126 456.8 313 70.0
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.3e-126 456.8 315 69.2
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.7e-126 456.4 297 74.7
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.1e-125 453.8 315 69.5
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 9.6e-125 450.7 306 72.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 2.1e-124 449.5 319 68.0
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 2.8e-124 449.1 360 64.4
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 6.2e-124 448.0 303 71.3
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.1e-123 447.2 317 68.5
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.1e-123 447.2 303 72.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 3.1e-123 445.7 338 68.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 4.0e-123 445.3 317 67.5
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 5.8e-122 441.4 317 66.9
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.9e-120 436.4 317 66.2
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 3.2e-120 435.6 324 65.4
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 5.4e-120 434.9 317 69.7
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 7.1e-120 434.5 316 67.4
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 4.6e-119 431.8 316 67.4
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 6.0e-119 431.4 315 67.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.3e-118 429.5 317 67.8
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.1e-117 427.2 302 68.5
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.6e-116 423.3 311 67.5
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 2.8e-116 422.5 316 64.9
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 3.6e-116 422.2 317 68.8
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 8.1e-116 421.0 303 66.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.4e-115 420.2 312 66.7
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.2e-114 417.2 305 68.9
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.5e-114 416.8 317 64.7
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.0e-114 416.4 319 66.5
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 9.9e-114 414.1 297 71.0
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 4.9e-113 411.8 268 75.4
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.4e-112 410.2 317 66.2
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 4.2e-112 408.7 317 64.0
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 6.0e-111 404.8 302 66.6
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-108 397.1 338 62.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.1e-101 374.0 314 63.4
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.5e-101 372.9 266 67.7
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.6e-100 370.2 313 60.4
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 3.4e-98 362.5 257 68.5
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 3.8e-97 359.0 233 74.7
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.0e-97 358.6 270 67.8
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.0e-97 358.6 270 67.8
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.8e-94 350.1 248 66.9
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 4.2e-88 328.9 321 51.1
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.6e-87 325.9 314 50.3
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.8e-83 313.5 256 63.3
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.0e-82 310.1 316 53.2
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.1e-80 304.3 195 73.8
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.4e-80 301.2 311 49.2
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.2e-79 300.8 213 66.7
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.2e-79 300.8 314 47.8
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 3.6e-79 299.3 181 81.2
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.5e-77 293.9 216 66.7
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 6.3e-76 288.5 233 62.7
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 2.3e-70 270.0 334 48.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.5e-69 267.3 308 43.8
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 6.5e-65 251.9 267 49.8
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.0e-57 228.0 145 75.9
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 5.5e-56 222.2 339 37.8
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 5.0e-49 199.1 127 73.2
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 5.2e-46 189.1 129 70.5
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 2.6e-45 186.8 228 44.3
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.2e-34 151.4 247 38.5
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.8e-30 137.5 103 65.0
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 7.8e-26 122.1 87 67.8
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.3e-25 121.3 93 61.3
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 8.4e-20 102.1 210 34.3
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 4.6e-18 96.3 69 69.6
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 4.3e-08 63.2 70 44.3
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.1e-06 58.5 44 59.1
MELO3C033367.2 Cucumis melo HOM05D006919 ORTHO05D170968 5.3e-06 56.2 57 52.6


User provided reference genes

Program Settings