Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 4.1e-156 554.7 281 100.0
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 2.3e-42 176.8 280 40.7
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 1.4e-39 167.5 294 40.8
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 4.1e-39 166.0 291 38.1
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 6.0e-38 162.2 270 40.4
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 6.0e-38 162.2 272 42.3
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 1.7e-37 160.6 380 34.5
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 3.0e-37 159.8 317 36.3
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 3.0e-37 159.8 284 38.4
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 6.6e-37 158.7 294 37.8
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 8.6e-37 158.3 268 38.1
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 1.1e-36 157.9 275 37.5
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 2.5e-36 156.8 277 38.3
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 2.5e-36 156.8 368 34.8
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 3.3e-36 156.4 275 37.5
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 3.3e-36 156.4 275 37.5
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 3.3e-36 156.4 280 38.2
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 4.3e-36 156.0 276 36.2
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 1.2e-35 154.5 286 36.7
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 1.6e-35 154.1 301 38.2
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 2.1e-35 153.7 277 38.3
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 3.6e-35 152.9 224 44.2
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 3.6e-35 152.9 274 37.6
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 8.1e-35 151.8 277 35.7
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 1.1e-34 151.4 280 37.1
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 1.8e-34 150.6 351 35.0
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 1.8e-34 150.6 277 35.7
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 3.1e-34 149.8 268 36.9
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 1.2e-33 147.9 297 35.0
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 1.5e-33 147.5 332 34.0
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 2.6e-33 146.7 305 35.4
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 4.4e-33 146.0 266 36.8
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 1.3e-32 144.4 294 36.7
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 2.2e-32 143.7 336 33.0
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 3.8e-32 142.9 278 37.4
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 4.9e-32 142.5 323 34.7
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 1.1e-31 141.4 293 34.1
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 1.1e-31 141.4 265 35.8
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 1.9e-31 140.6 317 34.7
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 1.9e-31 140.6 329 33.1
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.4e-31 140.2 281 35.6
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 3.2e-31 139.8 281 34.9
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 5.4e-31 139.0 274 34.7
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 7.1e-31 138.7 273 39.2
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 1.2e-30 137.9 233 39.5
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 1.6e-30 137.5 327 32.7
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 2.1e-30 137.1 294 32.7
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.1e-30 137.1 273 34.4
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 6.0e-30 135.6 334 32.3
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 1.3e-29 134.4 334 31.7
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 1.3e-29 134.4 351 33.6
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 1.7e-29 134.0 333 31.2
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 2.3e-29 133.7 277 33.6
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 3.0e-29 133.3 334 32.3
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 5.1e-29 132.5 308 32.8
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 7.3e-28 128.6 316 31.6
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 9.6e-28 128.3 283 34.6
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 1.2e-27 127.9 289 32.5
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 3.6e-27 126.3 300 34.0
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 4.0e-26 122.9 300 35.3
AL5G16780 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 3.8e-24 116.3 251 34.3
AL7G49210 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 1.1e-23 114.8 260 33.1
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 1.1e-23 114.8 303 31.4
Thecc.04G022100 Theobroma cacao HOM05D006554 ORTHO05D008778 1.9e-23 114.0 185 36.8
Carub.0005s0577 Capsella rubella HOM05D006554 ORTHO05D008778 2.4e-23 113.6 257 33.9
Sp7g01270 Schrenkiella parvula HOM05D006554 ORTHO05D008778 4.2e-23 112.8 259 30.9
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 7.1e-23 112.1 258 33.3
ECA246G2886 Erigeron canadensis HOM05D006554 ORTHO05D008778 1.2e-22 111.3 298 30.9
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 4.6e-22 109.4 254 32.3
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 7.8e-22 108.6 261 33.0
A04p13620 Brassica napus HOM05D004424 ORTHO05D005476 7.8e-22 108.6 268 32.5
BraA04t17023Z Brassica rapa HOM05D004424 ORTHO05D005476 7.8e-22 108.6 268 32.5
AT3G27420 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 1.3e-21 107.8 246 33.7
BolC4t26342H Brassica oleracea HOM05D006554 ORTHO05D008778 2.3e-21 107.1 264 31.4
CSS0050446 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 2.3e-21 107.1 116 50.9
C04p47410 Brassica napus HOM05D004424 ORTHO05D005476 3.0e-21 106.7 264 32.6
BolC4t27196H Brassica oleracea HOM05D006554 ORTHO05D008778 5.1e-21 105.9 292 30.8
Thhalv10004828m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 5.1e-21 105.9 252 34.5
Sp2g16620 Schrenkiella parvula HOM05D006554 ORTHO05D008778 5.1e-21 105.9 253 34.8
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 6.6e-21 105.5 343 30.6
CARHR261360 Cardamine hirsuta HOM05D006554 ORTHO05D008778 2.5e-20 103.6 263 33.5
Carub.0007s3489 Capsella rubella HOM05D006554 ORTHO05D008778 3.3e-20 103.2 256 30.5
ATR0199G021 Amborella trichopoda HOM05D006554 ORTHO05D008778 2.1e-19 100.5 231 36.8
Atru.chr6.2449 Acer truncatum HOM05D006554 ORTHO05D008778 2.8e-19 100.1 102 48.0
Thhalv10027933m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 1.8e-18 97.4 259 29.0
PSO675G3751 Papaver somniferum HOM05D006554 ORTHO05D008778 1.8e-18 97.4 281 29.5
Psat7g108920 Pisum sativum HOM05D006554 ORTHO05D008778 5.3e-18 95.9 207 35.7
BcaC03g17463 Brassica carinata HOM05D006554 ORTHO05D017433 9.0e-18 95.1 253 33.2
Aa31LG9G1020 Aethionema arabicum HOM05D006554 ORTHO05D008778 1.2e-17 94.7 267 30.0
PSO541G1758 Papaver somniferum HOM05D006554 ORTHO05D008778 1.5e-17 94.4 282 29.4
CARHR148770 Cardamine hirsuta HOM05D006554 ORTHO05D008778 2.0e-17 94.0 252 29.8
C02p54190 Brassica napus HOM05D006554 ORTHO05D008778 3.4e-17 93.2 253 32.8
HPP92_003738 Vanilla planifolia HOM05D006554 ORTHO05D008778 1.7e-16 90.9 256 29.3
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 2.2e-16 90.5 294 28.2
A02p35470 Brassica napus HOM05D006554 ORTHO05D017433 2.9e-16 90.1 251 31.5
BraA02t08548Z Brassica rapa HOM05D006554 ORTHO05D017433 2.9e-16 90.1 251 31.5
BolC2t11482H Brassica oleracea HOM05D006554 ORTHO05D008778 4.9e-16 89.4 253 32.4
VMungo1383G1633 Vigna mungo HOM05D006554 ORTHO05D008778 2.7e-14 83.6 103 40.8
BcaB06g27536 Brassica carinata HOM05D006554 ORTHO05D008778 6.0e-14 82.4 140 34.3
Atru.chr6.2450 Acer truncatum HOM05D006554 ORTHO05D008778 3.0e-13 80.1 153 37.9
CDE09G0234 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 1.1e-12 78.2 106 42.5
CDE02G2727 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 1.5e-12 77.8 113 38.1
COL.COLO4_29198 Corchorus olitorius HOM05D006554 ORTHO05D008778 1.3e-11 74.7 192 32.8
CSS0049853 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 1.6e-11 74.3 71 50.7
BcaB07g30158 Brassica carinata HOM05D006554 ORTHO05D008778 4.8e-11 72.8 126 37.3
SEGI_16878 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 1.1e-10 71.6 91 46.2
Cpa.g.sc130.63 Carica papaya HOM05D006554 ORTHO05D008778 3.4e-09 66.6 127 32.3
DCAR_002966 Daucus carota HOM05D006554 ORTHO05D008778 5.8e-09 65.9 195 31.3
SHI53794 Sapria himalayana HOM05D006554 ORTHO05D008778 1.3e-08 64.7 188 26.1
Ca_06565_v3 Cicer arietinum L. HOM05D006554 ORTHO05D008778 3.8e-08 63.2 143 32.2
Mapoly0010s0030 Marchantia polymorpha HOM05D000336 ORTHO05D002705 3.8e-08 63.2 92 34.8
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.4e-07 60.5 153 34.0
Cpa.g.sc30.64 Carica papaya HOM05D000336 ORTHO05D002705 3.2e-07 60.1 101 38.6
MSTRG.4151 Avicennia marina HOM05D000336 ORTHO05D002705 4.2e-07 59.7 138 30.4
unitig_748.g8305 Utricularia gibba HOM05D000336 ORTHO05D002705 4.2e-07 59.7 135 31.1
Psat6g044640 Pisum sativum HOM05D000336 ORTHO05D002705 7.1e-07 58.9 102 38.2
Pp3c22_7000 Physcomitrium patens HOM05D000336 ORTHO05D002705 1.2e-06 58.2 120 32.5
Rhsim04G0175400 Rhododendron simsii HOM05D000336 ORTHO05D002705 1.2e-06 58.2 105 39.0
SalBow3G1252 Salvia bowleyana HOM05D000336 ORTHO05D002705 1.6e-06 57.8 88 35.2
TAR633G1495 Trochodendron aralioides HOM05D000336 ORTHO05D002705 2.1e-06 57.4 92 38.0
Cc03_g05840 Coffea canephora HOM05D000336 ORTHO05D002705 2.7e-06 57.0 121 32.2
Medtr6g033375 Medicago truncatula HOM05D000336 ORTHO05D002705 2.7e-06 57.0 134 34.3
Prupe.4G121200 Prunus persica HOM05D000336 ORTHO05D002705 2.7e-06 57.0 102 39.2
SEGI_39566 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 2.7e-06 57.0 129 28.7
Manes.03G072850 Manihot esculenta HOM05D000336 ORTHO05D002705 4.6e-06 56.2 102 37.3
TWI60G1326 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 4.6e-06 56.2 88 31.8
TAR636G0998 Trochodendron aralioides HOM05D000336 ORTHO05D002705 4.6e-06 56.2 96 35.4
VMungo0464G0405 Vigna mungo HOM05D000336 ORTHO05D002705 4.6e-06 56.2 135 34.1
VMungo1383G3169 Vigna mungo HOM05D006554 ORTHO05D008778 4.6e-06 56.2 156 30.8
Actinidia35803 Actinidia chinensis HOM05D000336 ORTHO05D002705 6.0e-06 55.8 96 38.5
Eucgr.C03321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 6.0e-06 55.8 63 49.2
Eucgr.L02321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 6.0e-06 55.8 63 49.2
Lj2g0014987 Lotus japonicus HOM05D000336 ORTHO05D002705 7.9e-06 55.5 121 32.2
MBI02_g34318_MAGBIO Magnolia biondii HOM05D000336 ORTHO05D002705 7.9e-06 55.5 88 35.2
Phvul.004G074600 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 7.9e-06 55.5 135 33.3


User provided reference genes

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