Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 2.1e-70 268.9 133 100.0
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.2e-30 136.0 136 58.8
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 1.6e-28 129.8 130 59.2
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 2.5e-26 122.5 124 57.3
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 7.2e-26 120.9 125 56.0
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 9.4e-26 120.6 123 61.0
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 2.1e-25 119.4 119 59.7
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.7e-25 119.0 126 57.9
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 6.1e-25 117.9 128 56.2
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.8e-24 116.3 123 57.7
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.8e-24 116.3 125 60.0
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 2.3e-24 115.9 136 51.5
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 3.0e-24 115.5 94 69.1
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 3.0e-24 115.5 84 70.2
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 6.8e-24 114.4 123 56.9
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 6.8e-24 114.4 123 56.9
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 1.2e-23 113.6 86 66.3
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 1.2e-23 113.6 124 58.9
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.5e-23 113.2 126 54.0
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.5e-23 113.2 133 51.9
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.5e-23 113.2 126 54.0
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.5e-23 113.2 96 59.4
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 2.0e-23 112.8 131 55.7
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 2.0e-23 112.8 134 53.0
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 3.4e-23 112.1 130 56.2
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 4.4e-23 111.7 137 56.2
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 5.7e-23 111.3 112 58.9
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.5e-23 110.9 137 55.5
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.5e-23 110.9 137 56.2
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 9.8e-23 110.5 96 67.7
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 9.8e-23 110.5 90 68.9
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.7e-22 109.8 130 58.5
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 1.7e-22 109.8 127 50.4
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.7e-22 109.8 128 53.9
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 2.2e-22 109.4 85 70.6
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.2e-22 109.4 88 69.3
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 2.8e-22 109.0 117 55.6
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.4e-21 106.7 96 63.5
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 7.0e-21 104.4 128 54.7
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 7.0e-21 104.4 121 50.4
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 9.1e-21 104.0 109 57.8
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 2.7e-20 102.4 94 63.8
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.5e-20 102.1 86 64.0
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.5e-20 102.1 86 64.0
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 3.5e-20 102.1 93 60.2
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 4.5e-20 101.7 87 70.1
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 5.9e-20 101.3 97 57.7
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.3e-19 99.4 82 65.9
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.9e-19 99.0 86 62.8
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 6.6e-19 97.8 87 59.8
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 8.6e-19 97.4 112 55.4
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.1e-18 97.1 120 51.7
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 1.1e-18 97.1 100 58.0
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.9e-18 96.3 141 46.8
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 2.5e-18 95.9 90 64.4
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.5e-18 95.9 87 65.5
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.5e-18 95.9 87 65.5
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 3.3e-18 95.5 86 62.8
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 4.2e-18 95.1 87 58.6
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 4.2e-18 95.1 136 47.8
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 4.7e-17 91.7 99 53.5
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 6.1e-17 91.3 88 60.2
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 8.0e-17 90.9 78 66.7
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.8e-16 89.7 92 54.3
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 2.3e-16 89.4 128 46.9
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 5.2e-16 88.2 73 68.5
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 1.2e-15 87.0 128 42.2
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.5e-15 86.7 128 43.8
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 1.5e-15 86.7 76 61.8
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 2.0e-15 86.3 93 51.6
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 5.7e-15 84.7 120 50.0
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 7.5e-15 84.3 65 69.2
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.3e-14 83.6 79 59.5
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 2.2e-14 82.8 93 50.5
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 2.2e-14 82.8 93 50.5
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 2.2e-14 82.8 93 50.5
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 2.2e-14 82.8 93 50.5
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.8e-14 82.4 122 48.4
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 6.3e-14 81.3 121 43.0
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 8.3e-14 80.9 127 44.1
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.4e-13 80.1 73 63.0
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.8e-13 79.7 77 57.1
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.8e-13 79.7 135 40.7
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 2.4e-13 79.3 71 59.2
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 4.1e-13 78.6 73 61.6
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 4.1e-13 78.6 73 61.6
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 5.4e-13 78.2 73 63.0
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 9.2e-13 77.4 73 60.3
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.2e-12 77.0 78 56.4
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.6e-12 76.6 73 60.3
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 2.0e-12 76.3 73 63.0
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 2.0e-12 76.3 73 63.0
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 1.0e-11 73.9 74 60.8
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 1.0e-11 73.9 142 38.7
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.0e-11 73.9 117 43.6
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 1.7e-11 73.2 111 45.0
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 2.9e-11 72.4 73 60.3
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 5.0e-11 71.6 71 53.5
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 6.6e-11 71.2 72 56.9
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 6.6e-11 71.2 72 56.9
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.9e-10 69.7 79 51.9
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 4.3e-10 68.6 73 57.5
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 1.2e-09 67.0 73 56.2
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 8.0e-09 64.3 107 42.1
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 1.5e-07 60.1 74 52.7


User provided reference genes

Program Settings