Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 0.0e+00 1323.1 668 100.0
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 2.8e-259 898.7 676 67.0
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 8.1e-259 897.1 673 69.2
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 1.1e-258 896.7 676 66.9
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 8.9e-258 893.6 673 69.1
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 8.9e-258 893.6 633 70.9
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 8.9e-258 893.6 676 66.4
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 1.5e-257 892.9 670 68.2
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 1.0e-253 880.2 674 65.6
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 2.3e-253 879.0 673 65.1
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 6.6e-253 877.5 663 66.7
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 9.6e-252 873.6 662 66.5
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 1.2e-251 873.2 637 68.4
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 1.2e-251 873.2 673 64.6
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 8.1e-251 870.5 673 64.5
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 5.2e-250 867.8 663 66.2
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 6.9e-250 867.5 671 65.3
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 2.9e-248 862.1 670 65.1
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 1.1e-247 860.1 639 66.0
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 4.2e-247 858.2 673 64.2
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 9.3e-247 857.1 676 64.8
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 3.9e-245 851.7 668 65.1
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 1.6e-243 846.3 677 63.1
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 2.8e-243 845.5 668 64.5
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 6.2e-243 844.3 671 65.1
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 8.1e-243 844.0 671 64.7
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 1.1e-242 843.6 671 64.7
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.0e-242 841.6 671 64.8
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 1.4e-239 833.2 674 65.0
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 5.4e-239 831.2 635 65.2
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 1.2e-238 830.1 639 65.6
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 1.2e-238 830.1 639 66.0
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 2.7e-238 828.9 676 64.3
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 3.5e-238 828.6 637 65.6
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 3.5e-238 828.6 675 63.1
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 5.1e-237 824.7 682 61.7
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 8.7e-237 823.9 676 62.9
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 1.9e-236 822.8 695 61.7
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 3.7e-235 818.5 665 64.2
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 4.8e-235 818.1 646 65.0
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 1.4e-234 816.6 666 62.0
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 1.2e-233 813.5 666 63.7
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 2.0e-233 812.8 670 64.0
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 2.6e-233 812.4 675 63.0
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 1.7e-232 809.7 640 65.0
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 3.8e-232 808.5 638 63.2
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 3.8e-232 808.5 664 63.7
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 4.9e-232 808.1 665 63.8
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 6.4e-232 807.7 639 63.8
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 8.4e-232 807.4 666 61.1
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 2.4e-231 805.8 639 64.9
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 5.5e-231 804.7 660 62.4
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 7.1e-231 804.3 592 66.2
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 6.0e-230 801.2 662 63.4
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 2.3e-229 799.3 644 63.5
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 3.0e-229 798.9 664 62.5
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 1.9e-228 796.2 671 59.9
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.9e-228 796.2 668 59.6
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 2.5e-228 795.8 666 62.5
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 1.3e-227 793.5 664 60.5
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 4.8e-227 791.6 663 61.7
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 4.8e-227 791.6 666 60.7
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 1.1e-226 790.4 666 60.1
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 4.0e-226 788.5 666 61.0
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 5.3e-226 788.1 653 61.6
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 7.6e-225 784.3 667 60.4
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 7.6e-225 784.3 668 61.5
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 1.0e-224 783.9 669 61.3
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 3.8e-224 781.9 642 62.1
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 4.2e-223 778.5 670 60.6
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 9.3e-223 777.3 635 63.0
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 1.6e-222 776.5 662 60.7
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 2.1e-222 776.2 662 61.0
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 3.5e-222 775.4 662 60.6
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 4.6e-222 775.0 667 60.0
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 6.0e-222 774.6 635 62.2
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 1.0e-221 773.9 662 61.0
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 5.1e-221 771.5 650 61.8
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 8.7e-221 770.8 663 59.6
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 1.1e-220 770.4 671 60.2
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 7.4e-220 767.7 641 61.6
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 6.3e-219 764.6 663 60.0
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 1.5e-217 760.0 583 65.9
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 2.6e-217 759.2 639 61.3
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 3.4e-217 758.8 639 61.2
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 6.5e-216 754.6 638 60.8
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 4.2e-215 751.9 639 60.7
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 4.2e-215 751.9 615 62.9
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 7.2e-215 751.1 673 58.8
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.6e-214 748.4 580 65.0
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 3.0e-213 745.7 579 63.7
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 4.3e-212 741.9 601 62.6
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 2.2e-211 739.6 669 58.9
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 3.8e-208 728.8 672 57.1
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 2.5e-207 726.1 641 55.9
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 9.7e-204 714.1 663 55.5
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 1.3e-203 713.8 639 59.2
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 2.8e-203 712.6 699 55.1
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 6.5e-200 701.4 611 58.8
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 1.1e-196 690.6 575 61.4
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 8.0e-182 641.3 546 59.3
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 5.9e-169 598.6 559 55.5
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 4.4e-164 582.4 499 58.9
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 7.0e-162 575.1 669 48.0
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 4.4e-156 555.8 502 58.0
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 2.1e-150 537.0 556 53.6
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.3e-149 533.5 574 49.0
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 1.5e-140 504.2 429 58.5
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 1.6e-129 467.6 641 41.5
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 3.6e-126 456.4 454 51.8
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 1.6e-121 441.0 795 36.1
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 6.2e-118 429.1 673 40.7
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 5.8e-116 422.5 391 60.1
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 7.9e-113 412.1 393 54.2
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 1.9e-106 391.0 563 40.9
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 2.6e-92 344.0 204 77.9
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 1.5e-84 318.2 275 58.2
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 2.1e-81 307.8 322 52.8
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 2.5e-74 284.3 624 32.5
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 1.3e-70 271.9 222 63.1
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 2.5e-66 257.7 226 57.1
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 2.0e-63 248.1 225 55.1
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 7.2e-58 229.6 708 29.8
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 9.5e-58 229.2 406 39.9
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 1.6e-57 228.4 594 31.1
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 2.3e-56 224.6 661 30.9
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 4.6e-44 183.7 172 58.7
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 4.3e-42 177.2 140 67.1
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 7.3e-42 176.4 237 43.5
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.5e-42 176.0 237 43.0
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 6.2e-41 173.3 121 71.9
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 2.2e-38 164.9 145 54.5
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 3.0e-35 154.5 140 58.6
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 2.1e-33 148.3 112 63.4
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.3e-32 144.8 161 49.7
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 5.2e-32 143.7 163 49.1
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.9e-30 137.9 183 39.3
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 8.6e-27 126.3 254 34.3
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 1.5e-26 125.6 259 37.1
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.5e-26 124.8 254 33.9
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.3e-26 124.4 254 33.9
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.3e-26 124.4 254 33.9
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 9.6e-26 122.9 244 34.8
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 1.1e-24 119.4 107 66.4
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 1.7e-22 112.1 205 37.6
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.2e-20 105.9 184 37.0
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 2.1e-20 105.1 184 37.0
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 2.7e-20 104.8 184 36.4
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 6.0e-20 103.6 127 44.9
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 2.1e-17 95.1 85 63.5
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 1.4e-16 92.4 64 76.6
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 1.3e-11 75.9 79 51.9
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 1.1e-10 72.8 79 49.4
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 4.3e-10 70.9 40 77.5
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 8.1e-09 66.6 50 58.0


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