Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 9.6e-159 563.5 303 100.0
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 8.7e-59 231.5 284 51.8
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.6e-57 226.1 308 54.5
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 2.7e-52 209.9 302 49.3
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.5e-52 209.5 302 48.3
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 7.8e-52 208.4 304 47.7
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.3e-51 207.6 309 47.6
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 2.3e-51 206.8 310 45.8
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 6.6e-51 205.3 310 45.5
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 1.1e-48 198.0 292 48.3
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.4e-48 197.6 301 45.2
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.2e-47 194.5 297 49.8
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.5e-47 194.1 293 46.8
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.3e-46 191.0 311 46.3
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 1.1e-45 188.0 279 46.2
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.9e-45 187.2 284 47.9
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 1.9e-45 187.2 270 50.4
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 2.4e-45 186.8 341 41.1
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.2e-45 186.4 284 47.9
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 1.2e-44 184.5 353 43.1
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 3.5e-44 183.0 284 46.8
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 3.5e-44 183.0 356 41.6
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.8e-43 180.6 247 50.6
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 5.1e-43 179.1 300 46.0
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.9e-42 177.2 326 45.1
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.9e-42 177.2 324 44.8
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 1.9e-42 177.2 262 49.6
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 9.6e-42 174.9 294 45.9
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 1.6e-41 174.1 297 43.8
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 2.1e-41 173.7 331 41.4
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 2.1e-41 173.7 282 44.0
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 3.7e-41 172.9 283 44.9
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.1e-40 171.4 260 49.2
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.4e-40 171.0 306 41.8
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.1e-40 169.9 218 54.6
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 5.3e-40 169.1 302 45.0
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 5.3e-40 169.1 329 41.3
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 9.0e-40 168.3 303 42.6
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.2e-39 167.9 321 44.2
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.2e-39 167.9 321 44.2
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 1.2e-39 167.9 283 44.2
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.5e-39 167.5 321 44.2
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 2.0e-39 167.2 302 41.7
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 3.4e-39 166.4 292 45.5
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 2.2e-38 163.7 313 39.9
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 2.2e-38 163.7 169 57.4
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 3.8e-38 162.9 303 44.2
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 4.9e-38 162.5 254 46.1
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 8.4e-38 161.8 310 44.5
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 3.2e-37 159.8 301 41.9
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.2e-37 159.5 238 51.3
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.2e-37 159.5 238 51.3
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.2e-36 157.9 289 45.7
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 1.6e-36 157.5 324 40.4
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.0e-35 154.8 292 42.8
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.3e-35 154.5 276 44.6
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 3.9e-35 152.9 308 39.9
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 3.9e-35 152.9 277 44.8
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 5.1e-35 152.5 294 40.8
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 8.7e-35 151.8 293 41.3
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.1e-34 151.4 306 39.2
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.1e-34 151.4 306 39.2
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.1e-34 151.4 306 39.2
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.5e-34 151.0 286 42.3
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 1.9e-34 150.6 289 41.9
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 2.5e-34 150.2 308 41.2
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 3.3e-34 149.8 302 40.4
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 4.3e-34 149.4 290 41.4
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 4.3e-34 149.4 290 41.4
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 7.4e-34 148.7 291 41.6
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.3e-33 147.9 291 43.0
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.6e-33 147.5 194 52.1
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 3.7e-33 146.4 312 39.1
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 6.2e-33 145.6 288 41.7
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.4e-32 144.4 312 39.4
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.4e-32 144.4 288 42.4
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.4e-32 144.4 266 41.7
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 3.1e-32 143.3 169 56.8
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 5.3e-32 142.5 284 40.5
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 1.5e-31 141.0 253 44.7
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.5e-31 141.0 152 55.3
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 2.0e-31 140.6 279 40.1
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 4.5e-31 139.4 324 38.0
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 7.6e-31 138.7 250 40.4
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 2.9e-30 136.7 227 48.0
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 4.9e-30 136.0 279 40.1
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.9e-29 134.0 166 51.2
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 2.5e-29 133.7 312 40.7
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 1.2e-28 131.3 209 46.9
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 2.3e-27 127.1 325 37.5
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 6.7e-27 125.6 250 39.6
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 6.7e-27 125.6 239 41.8
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 1.9e-26 124.0 200 45.0
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 4.3e-26 122.9 259 39.8
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 7.4e-26 122.1 240 41.7
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 9.7e-26 121.7 209 43.5
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.3e-25 121.3 99 70.7
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 1.6e-25 120.9 294 39.8
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 3.7e-25 119.8 279 41.2
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.7e-25 119.8 238 41.2
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 3.7e-25 119.8 264 38.3
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 6.3e-25 119.0 259 40.2
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 1.1e-24 118.2 295 38.0
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 1.4e-24 117.9 286 35.7
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 3.1e-24 116.7 278 38.1
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 4.1e-24 116.3 224 42.4
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.1e-24 116.3 151 53.6
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.3e-24 115.9 143 53.8
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 1.0e-22 111.7 265 38.5
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 6.5e-22 109.0 238 39.9
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 4.2e-21 106.3 206 39.3
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 4.2e-21 106.3 300 36.7
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 4.2e-21 106.3 222 41.0
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 5.5e-21 105.9 170 48.2
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 2.4e-16 90.5 87 62.1
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.9e-16 89.0 60 75.0
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 8.5e-14 82.0 118 48.3
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.1e-12 77.4 52 75.0
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.9e-12 75.5 178 36.5
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 8.8e-11 72.0 61 63.9
Eucgr.B00488 Eucalyptus grandis HOM05D002094 ORTHO05D002113 1.8e-08 64.3 130 41.5
Eucgr.B00489 Eucalyptus grandis HOM05D002094 ORTHO05D007260 5.3e-08 62.8 150 39.3
Eucgr.C00650 Eucalyptus grandis HOM05D002094 ORTHO05D007260 5.3e-08 62.8 150 39.3
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 1.3e-06 58.2 37 75.7


User provided reference genes

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