Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 5.1e-168 594.3 302 100.0
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 7.4e-143 510.8 300 84.7
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 4.8e-142 508.1 302 82.1
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 1.1e-141 506.9 303 83.5
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 3.1e-141 505.4 300 83.0
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 2.0e-140 502.7 300 82.0
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.6e-140 502.3 303 81.8
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 3.4e-140 501.9 303 83.2
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 3.4e-140 501.9 300 83.3
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 5.8e-140 501.1 300 83.0
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 7.6e-140 500.7 300 83.0
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 1.3e-139 500.0 300 82.3
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 1.7e-139 499.6 303 81.5
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 2.9e-139 498.8 303 81.2
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 3.8e-139 498.4 303 80.9
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 3.8e-139 498.4 303 81.2
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 4.9e-139 498.0 300 82.7
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 6.5e-139 497.7 300 83.3
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 1.1e-138 496.9 303 81.2
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 1.9e-138 496.1 301 80.7
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 3.2e-138 495.4 303 80.9
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 5.5e-138 494.6 303 80.9
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 7.1e-138 494.2 303 81.2
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 7.1e-138 494.2 316 78.5
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 7.1e-138 494.2 300 81.0
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 9.3e-138 493.8 302 81.1
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 1.6e-137 493.0 303 81.8
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 2.1e-137 492.7 303 80.5
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 2.1e-137 492.7 301 81.1
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.7e-137 492.3 300 80.7
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 2.7e-137 492.3 303 82.2
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 4.6e-137 491.5 303 80.9
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 1.0e-136 490.3 303 80.2
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 1.0e-136 490.3 302 79.8
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 1.0e-136 490.3 301 79.7
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 1.3e-136 490.0 302 80.1
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 1.8e-136 489.6 303 79.9
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 1.8e-136 489.6 301 80.7
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 2.3e-136 489.2 303 79.9
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 3.0e-136 488.8 302 79.5
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 3.0e-136 488.8 303 80.5
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 3.9e-136 488.4 301 79.7
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 5.1e-136 488.0 303 79.9
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 1.1e-135 486.9 302 79.1
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 3.3e-135 485.3 303 80.2
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 3.3e-135 485.3 303 80.5
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 7.4e-135 484.2 303 79.5
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 7.4e-135 484.2 303 79.5
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 7.4e-135 484.2 300 78.3
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 9.6e-135 483.8 299 80.3
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 1.3e-134 483.4 303 79.5
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 1.3e-134 483.4 303 79.5
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 3.7e-134 481.9 303 79.5
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 3.7e-134 481.9 303 79.5
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 4.8e-134 481.5 301 77.7
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 4.8e-134 481.5 301 79.4
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 4.8e-134 481.5 303 79.5
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 6.2e-134 481.1 297 80.5
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 8.2e-134 480.7 300 77.7
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 1.1e-133 480.3 303 78.9
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 1.4e-133 479.9 300 78.3
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 1.8e-133 479.6 300 77.3
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 2.4e-133 479.2 303 78.9
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 2.4e-133 479.2 300 78.0
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 3.1e-133 478.8 299 79.3
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 9.0e-133 477.2 302 78.5
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 1.5e-132 476.5 300 77.7
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 2.0e-132 476.1 301 77.4
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 2.0e-132 476.1 303 77.2
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 2.6e-132 475.7 302 78.1
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 2.6e-132 475.7 303 77.9
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 3.4e-132 475.3 302 78.1
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 5.8e-132 474.6 302 78.1
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 5.8e-132 474.6 303 77.6
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 1.0e-131 473.8 305 77.4
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 1.3e-131 473.4 301 78.1
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 2.2e-131 472.6 301 78.1
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 2.2e-131 472.6 298 76.5
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 2.9e-131 472.2 303 77.2
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 2.9e-131 472.2 303 77.6
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 5.0e-131 471.5 303 76.9
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 6.5e-131 471.1 299 78.3
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 1.4e-130 469.9 303 77.9
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 2.5e-130 469.2 299 75.9
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 2.5e-130 469.2 298 78.2
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 3.2e-130 468.8 299 76.6
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 5.5e-130 468.0 303 76.2
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 7.1e-130 467.6 303 76.9
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 1.6e-129 466.5 300 74.7
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 1.6e-129 466.5 303 75.6
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 1.6e-129 466.5 303 76.9
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 1.0e-128 463.8 303 76.9
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 1.3e-128 463.4 303 75.6
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 3.9e-128 461.8 303 74.3
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 5.1e-128 461.5 303 75.2
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 5.1e-128 461.5 321 72.6
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 1.5e-127 459.9 299 74.9
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 2.5e-127 459.1 300 75.7
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 2.5e-127 459.1 300 76.0
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 7.4e-127 457.6 300 75.0
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 2.2e-126 456.1 303 75.2
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 6.3e-126 454.5 302 73.8
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 6.3e-126 454.5 303 73.6
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 1.1e-125 453.8 316 72.2
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 1.1e-125 453.8 303 73.6
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 1.8e-125 453.0 298 73.8
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 1.8e-125 453.0 303 74.3
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 2.4e-125 452.6 303 72.3
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 2.6e-124 449.1 309 72.5
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 8.5e-123 444.1 303 72.9
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 8.5e-123 444.1 300 74.3
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 9.4e-122 440.7 338 67.8
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 3.6e-121 438.7 339 67.6
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 8.2e-118 427.6 293 70.3
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 2.4e-117 426.0 256 81.6
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 6.9e-117 424.5 249 81.1
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 1.5e-116 423.3 340 63.8
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 1.7e-115 419.9 302 65.9
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 2.2e-115 419.5 259 79.2
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 7.2e-114 414.5 292 68.8
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 2.1e-113 412.9 287 70.0
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 3.9e-112 408.7 301 70.8
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 3.3e-111 405.6 299 68.9
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 6.3e-110 401.4 312 67.0
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 4.2e-106 388.7 295 66.8
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 8.8e-104 380.9 303 65.0
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 4.8e-102 375.2 306 63.7
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 5.2e-96 355.1 509 43.0
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 8.8e-96 354.4 300 62.7
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 2.0e-95 353.2 290 59.7
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 2.6e-95 352.8 209 79.9
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 1.4e-93 347.1 209 79.4
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 2.5e-90 336.3 220 76.4
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 2.2e-86 323.2 200 81.0
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 1.7e-78 297.0 242 66.9
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 2.9e-78 296.2 246 59.8
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 4.9e-78 295.4 292 52.1
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 1.5e-74 283.9 245 64.1
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 5.2e-64 248.8 154 79.9
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 2.0e-55 220.3 297 40.4
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 9.9e-55 218.0 300 42.3
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 7.6e-47 191.8 148 61.5
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 1.6e-44 184.1 108 80.6
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 1.7e-38 164.1 101 75.2
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.1e-36 157.1 84 88.1
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 1.0e-35 154.8 199 49.2
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 7.6e-31 138.7 84 77.4
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 1.5e-23 114.4 148 45.3
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 7.6e-23 112.1 259 27.4
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 1.0e-22 111.7 145 42.1
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 6.5e-22 109.0 83 67.5
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 1.2e-20 104.8 70 70.0
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 7.9e-20 102.1 63 71.4
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 3.9e-19 99.8 87 62.1
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 1.8e-16 90.9 86 58.1
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 1.2e-15 88.2 121 44.6
BcaB04g19294 Brassica carinata HOM05D004556 ORTHO05D005298 7.4e-10 68.9 95 48.4
RcHm_v2.0_Chr7g0229041 Rosa chinensis HOM05D004556 ORTHO05D005298 1.2e-07 61.6 40 70.0


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