Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.7e-156 556.2 344 100.0
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 1.4e-76 290.8 317 50.8
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 8.3e-74 281.6 318 58.2
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 1.2e-72 277.7 345 47.2
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 2.0e-72 276.9 333 58.0
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 1.7e-71 273.9 318 51.6
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 2.3e-71 273.5 344 52.6
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 2.9e-71 273.1 322 56.5
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 5.6e-70 268.9 343 57.1
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 5.6e-70 268.9 317 55.2
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 9.5e-70 268.1 342 54.1
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 6.1e-69 265.4 322 58.7
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.0e-68 264.6 319 57.7
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 1.4e-68 264.2 321 47.7
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 4.0e-68 262.7 312 57.4
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 5.2e-68 262.3 318 58.5
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 5.2e-68 262.3 298 60.4
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 1.2e-67 261.2 350 51.1
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 1.5e-67 260.8 318 58.2
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 1.5e-67 260.8 336 54.2
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 4.4e-67 259.2 318 57.9
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 4.4e-67 259.2 347 54.8
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 4.4e-67 259.2 318 57.9
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 4.4e-67 259.2 318 57.9
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 5.7e-67 258.8 317 54.3
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 7.5e-67 258.5 331 44.1
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 7.5e-67 258.5 317 57.1
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 7.5e-67 258.5 339 54.3
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 9.8e-67 258.1 325 45.5
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.7e-66 257.3 321 45.8
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 2.2e-66 256.9 345 45.8
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 2.2e-66 256.9 330 56.1
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 2.2e-66 256.9 318 52.8
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 2.2e-66 256.9 328 52.7
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.9e-66 256.5 300 45.0
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 4.9e-66 255.8 318 50.6
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 8.3e-66 255.0 317 57.1
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 1.4e-65 254.2 317 57.7
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.4e-65 254.2 311 44.4
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 1.4e-65 254.2 318 47.2
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 1.8e-65 253.8 316 43.7
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.8e-65 253.8 318 53.5
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 1.8e-65 253.8 317 42.6
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 3.2e-65 253.1 315 53.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 4.1e-65 252.7 324 56.8
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 5.4e-65 252.3 336 49.4
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 5.4e-65 252.3 311 54.0
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 7.0e-65 251.9 349 43.8
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 7.0e-65 251.9 317 42.6
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 1.2e-64 251.1 318 52.8
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 1.6e-64 250.8 318 55.3
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 1.6e-64 250.8 323 46.4
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 2.0e-64 250.4 318 44.3
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 3.5e-64 249.6 337 42.7
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 3.5e-64 249.6 317 42.6
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 5.9e-64 248.8 316 55.7
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 1.7e-63 247.3 329 55.0
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 3.9e-63 246.1 346 48.0
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 5.0e-63 245.7 342 40.9
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 5.0e-63 245.7 335 51.6
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 8.6e-63 245.0 318 56.0
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 8.6e-63 245.0 318 56.3
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 8.6e-63 245.0 318 56.0
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 8.6e-63 245.0 321 45.8
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 8.6e-63 245.0 327 41.9
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 1.9e-62 243.8 316 55.4
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 2.5e-62 243.4 318 56.0
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 4.3e-62 242.7 342 42.1
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 7.3e-62 241.9 331 54.1
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.2e-61 241.1 310 56.5
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.2e-61 241.1 296 44.3
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.6e-61 239.6 314 42.7
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.5e-59 234.2 342 50.0
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 2.0e-59 233.8 319 42.3
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.3e-58 231.1 319 42.0
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.7e-58 230.7 318 41.8
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.7e-58 230.7 318 41.8
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 1.7e-58 230.7 318 41.5
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 6.4e-58 228.8 327 53.8
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.1e-57 228.0 326 40.5
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 9.2e-57 224.9 311 41.5
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 9.2e-57 224.9 291 43.6
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.6e-56 224.2 315 50.5
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.0e-55 221.5 318 40.6
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 5.0e-55 219.2 336 42.0
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 2.5e-54 216.9 332 49.1
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 9.5e-54 214.9 332 38.9
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 2.2e-50 203.8 318 48.1
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 3.5e-48 196.4 316 36.1
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 4.1e-41 172.9 181 50.3
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 9.2e-41 171.8 162 51.9
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 2.3e-39 167.2 269 39.4
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 4.3e-38 162.9 168 48.8
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.6e-37 161.0 231 55.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 9.6e-30 135.2 151 47.0
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.3e-21 108.2 176 36.9
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 2.1e-21 107.5 98 59.2
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 5.8e-19 99.4 98 51.0
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 1.7e-18 97.8 211 34.6
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 4.2e-17 93.2 98 51.0
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 9.0e-12 75.5 82 48.8
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 5.8e-11 72.8 103 41.7
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 1.7e-10 71.2 182 41.8
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 7.1e-09 65.9 69 42.0
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 3.9e-07 60.1 45 64.4


User provided reference genes

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