Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 3.3e-116 421.8 219 100.0
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 1.2e-99 366.7 193 99.0
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 3.5e-62 242.3 185 70.3
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 4.6e-62 241.9 196 65.8
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 5.1e-61 238.4 146 82.2
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 2.5e-60 236.1 210 64.3
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 3.3e-60 235.7 148 78.4
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 7.4e-60 234.6 196 65.8
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 9.6e-60 234.2 154 76.6
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 1.6e-59 233.4 198 63.1
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 1.6e-59 233.4 206 62.6
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.8e-59 232.6 148 78.4
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.7e-59 232.3 148 77.0
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.1e-58 230.7 213 62.0
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.1e-58 230.7 148 76.4
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.1e-58 230.7 156 75.6
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 1.4e-58 230.3 214 60.3
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.4e-58 230.3 158 72.2
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.8e-58 229.9 143 79.0
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 3.1e-58 229.2 156 75.0
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.1e-58 228.8 148 76.4
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 4.1e-58 228.8 156 72.4
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 5.3e-58 228.4 206 58.7
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.2e-57 227.3 172 69.8
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.5e-57 226.9 155 74.8
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 2.6e-57 226.1 158 71.5
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 5.9e-57 224.9 163 70.6
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 7.6e-57 224.6 158 69.6
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 1.0e-56 224.2 211 60.2
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 1.3e-56 223.8 144 77.8
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 1.3e-56 223.8 194 62.4
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.7e-56 223.4 147 73.5
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 2.2e-56 223.0 175 69.1
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 2.9e-56 222.6 154 71.4
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 3.8e-56 222.2 157 70.1
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 8.5e-56 221.1 162 71.6
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 8.5e-56 221.1 139 79.9
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 1.1e-55 220.7 176 67.6
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.1e-55 220.7 207 59.4
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 1.9e-55 219.9 148 72.3
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 2.5e-55 219.5 183 66.1
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 3.2e-55 219.2 147 74.8
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 3.2e-55 219.2 157 73.9
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 4.2e-55 218.8 183 62.8
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 5.5e-55 218.4 216 57.9
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 7.2e-55 218.0 208 62.5
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 9.3e-55 217.6 215 58.6
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 9.3e-55 217.6 139 78.4
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 6.1e-54 214.9 156 68.6
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 7.9e-54 214.5 154 68.2
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 7.9e-54 214.5 206 59.2
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 1.0e-53 214.2 164 68.9
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.3e-53 213.0 150 71.3
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 2.3e-53 213.0 200 60.5
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 3.0e-53 212.6 188 60.6
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 3.0e-53 212.6 207 58.5
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 3.9e-53 212.2 150 70.7
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 3.9e-53 212.2 151 70.9
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 6.7e-53 211.5 156 66.0
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.1e-52 210.7 156 66.0
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 2.5e-52 209.5 147 69.4
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 2.5e-52 209.5 217 56.2
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.3e-52 209.1 147 70.1
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 4.3e-52 208.8 221 52.9
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 4.3e-52 208.8 158 64.6
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 5.7e-52 208.4 207 57.5
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 7.4e-52 208.0 156 71.2
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 9.7e-52 207.6 147 70.7
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.3e-51 207.2 155 64.5
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.3e-51 207.2 155 64.5
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.3e-51 207.2 152 67.8
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.3e-51 207.2 156 64.7
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.6e-51 206.8 210 54.8
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 1.6e-51 206.8 158 64.6
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 1.6e-51 206.8 158 64.6
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 2.2e-51 206.5 156 65.4
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 2.2e-51 206.5 147 70.1
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 2.2e-51 206.5 147 70.1
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 3.7e-51 205.7 158 65.2
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 3.7e-51 205.7 149 65.8
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 4.8e-51 205.3 203 55.2
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 6.3e-51 204.9 155 64.5
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 6.3e-51 204.9 155 64.5
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 6.3e-51 204.9 155 64.5
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 6.3e-51 204.9 137 75.9
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 6.3e-51 204.9 152 67.8
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 6.3e-51 204.9 156 67.3
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 8.2e-51 204.5 147 68.7
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 8.2e-51 204.5 154 64.3
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 1.4e-50 203.8 147 68.7
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 2.4e-50 203.0 147 68.7
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 2.4e-50 203.0 147 68.7
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 3.1e-50 202.6 205 56.6
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.2e-49 200.7 158 63.3
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.5e-49 200.3 156 62.2
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 1.5e-49 200.3 208 54.8
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 2.0e-49 199.9 125 78.4
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 2.6e-49 199.5 172 59.9
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 7.7e-49 198.0 195 54.4
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 1.7e-48 196.8 140 70.7
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 3.8e-48 195.7 150 66.0
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 8.5e-48 194.5 153 59.5
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 1.9e-47 193.4 154 64.3
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 1.9e-47 193.4 188 53.7
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 4.2e-47 192.2 142 66.9
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 5.5e-47 191.8 154 59.7
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 2.7e-46 189.5 153 60.1
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 2.7e-46 189.5 187 56.7
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 6.1e-46 188.3 113 83.2
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 6.1e-46 188.3 135 71.1
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 6.7e-45 184.9 192 50.5
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 7.4e-44 181.4 128 70.3
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 3.7e-43 179.1 128 69.5
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 6.3e-43 178.3 137 63.5
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 3.1e-42 176.0 128 68.0
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 3.1e-42 176.0 128 68.0
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.5e-41 173.7 120 70.0
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.4e-37 160.6 165 55.2
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 2.8e-35 152.9 198 47.5
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 1.4e-34 150.6 125 57.6
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 7.7e-33 144.8 126 53.2
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 1.7e-32 143.7 137 57.7
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 7.2e-31 138.3 144 49.3
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 7.0e-26 121.7 130 54.6
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.3e-24 117.5 80 71.2
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 8.5e-24 114.8 86 70.9
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.9e-23 113.6 65 83.1
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 9.4e-23 111.3 65 81.5
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 1.2e-17 94.4 157 40.1
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 2.6e-12 76.6 50 70.0
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 7.8e-09 65.1 122 32.8
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 1.0e-08 64.7 131 28.2
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 2.3e-08 63.5 49 65.3


User provided reference genes

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