Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.8e-102 375.9 189 100.0
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 5.8e-69 264.6 182 74.2
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 8.3e-68 260.8 189 73.5
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.1e-67 260.4 184 73.9
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 3.2e-67 258.8 183 71.6
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 9.2e-67 257.3 179 73.7
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 3.5e-66 255.4 180 71.7
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 6.0e-66 254.6 190 69.5
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 8.6e-65 250.8 181 71.8
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.9e-64 249.6 189 67.2
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 3.3e-64 248.8 179 71.5
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 4.3e-64 248.4 178 69.1
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 9.5e-64 247.3 185 69.2
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.1e-63 246.1 189 67.2
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 2.1e-63 246.1 180 66.7
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 2.1e-63 246.1 175 70.9
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 3.6e-63 245.4 185 70.3
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 3.6e-63 245.4 179 70.4
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 3.6e-63 245.4 179 70.9
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 8.0e-63 244.2 173 68.2
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.1e-62 243.8 193 65.3
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.1e-62 243.8 173 69.9
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 2.3e-62 242.7 179 69.3
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 3.1e-62 242.3 177 68.4
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 3.1e-62 242.3 175 69.7
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 4.0e-62 241.9 172 70.3
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 4.0e-62 241.9 179 70.4
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 4.0e-62 241.9 178 70.8
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 6.8e-62 241.1 179 67.6
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.2e-61 240.4 177 68.9
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 1.5e-61 240.0 163 73.6
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 2.0e-61 239.6 166 71.1
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.0e-61 239.6 178 68.0
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 4.4e-61 238.4 189 64.6
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 4.4e-61 238.4 174 68.4
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 4.4e-61 238.4 178 68.0
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 5.8e-61 238.0 180 69.4
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 5.8e-61 238.0 175 66.9
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 5.8e-61 238.0 161 71.4
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.5e-61 237.7 184 63.6
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.7e-60 236.5 179 65.9
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 2.9e-60 235.7 183 65.0
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 3.7e-60 235.3 175 68.0
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.7e-60 235.3 184 62.5
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.9e-60 235.0 184 62.5
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 6.4e-60 234.6 178 66.3
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 8.3e-60 234.2 182 69.2
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 8.3e-60 234.2 157 74.5
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.4e-59 233.4 174 67.8
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 1.4e-59 233.4 183 65.0
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.4e-59 232.6 170 68.2
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 2.4e-59 232.6 182 63.7
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 9.2e-59 230.7 186 63.4
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.2e-58 230.3 178 69.1
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.6e-58 229.9 173 66.5
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 2.1e-58 229.6 179 63.7
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 2.1e-58 229.6 186 62.9
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 2.7e-58 229.2 174 66.1
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 2.7e-58 229.2 173 66.5
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.5e-58 228.8 177 67.8
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 3.5e-58 228.8 168 69.6
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.5e-58 228.8 173 67.1
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 4.6e-58 228.4 170 68.2
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 5.1e-57 224.9 179 63.7
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 6.6e-57 224.6 177 63.3
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 8.6e-57 224.2 185 63.8
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 2.5e-56 222.6 178 65.7
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 7.3e-56 221.1 179 65.4
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 1.2e-55 220.3 171 66.1
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 8.1e-55 217.6 154 73.4
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 2.3e-54 216.1 190 63.7
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 5.2e-54 214.9 178 61.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.5e-53 213.4 178 62.9
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 5.8e-53 211.5 169 63.3
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 7.5e-53 211.1 167 64.1
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.3e-52 210.3 167 62.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 1.7e-52 209.9 163 65.0
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.9e-52 209.1 144 70.8
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 6.4e-52 208.0 180 60.0
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.9e-51 206.5 231 51.1
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 9.2e-51 204.1 169 61.5
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.2e-50 203.8 169 61.5
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.2e-50 203.8 169 61.5
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 2.7e-50 202.6 169 60.9
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 2.7e-50 202.6 169 60.9
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 3.5e-50 202.2 169 60.9
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 3.5e-50 202.2 144 71.5
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 1.3e-49 200.3 166 62.0
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.6e-47 193.4 136 71.3
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 2.1e-47 193.0 128 72.7
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 2.4e-46 189.5 132 70.5
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.2e-45 187.2 132 70.5
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 9.9e-45 184.1 183 53.0
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.5e-42 175.6 187 55.1
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 2.5e-40 169.5 129 69.0
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 9.0e-38 161.0 173 54.9
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.2e-37 160.6 164 51.8
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 2.6e-37 159.5 161 55.9
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 4.9e-36 155.2 198 48.5
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.1e-27 127.5 184 41.8
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 3.9e-25 119.0 101 61.4
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.3e-23 114.0 173 42.2
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.6e-23 113.6 188 36.2
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.6e-23 113.6 80 63.8
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.1e-22 109.4 80 66.2
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 9.0e-22 107.8 132 47.0
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 7.6e-21 104.8 91 60.4
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.9e-19 100.1 75 62.7
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 5.1e-17 92.0 138 39.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 4.8e-15 85.5 48 79.2
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 3.0e-09 66.2 41 75.6
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 9.7e-08 61.2 88 39.8
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.1e-06 57.8 39 64.1


User provided reference genes

Program Settings