Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2006 Punica granatum HOM05D006536 ORTHO05D005877 1.2e-82 309.7 151 100.0
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 3.5e-16 89.0 160 36.2
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 5.0e-15 85.1 154 33.8
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 1.3e-10 70.5 67 47.8
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.4e-09 67.0 149 30.2
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.4e-09 67.0 138 29.0
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.8e-09 66.6 63 42.9
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.4e-09 66.2 133 34.6
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 2.4e-09 66.2 150 32.0
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.1e-09 65.9 140 32.1
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 4.1e-09 65.5 63 42.9
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 4.1e-09 65.5 107 31.8
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 5.3e-09 65.1 133 32.3
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 5.3e-09 65.1 156 30.8
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.2e-08 63.9 160 28.1
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 1.2e-08 63.9 108 31.5
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 1.6e-08 63.5 105 32.4
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 1.6e-08 63.5 108 35.2
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.0e-08 63.2 129 31.0
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.0e-08 63.2 148 30.4
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 2.7e-08 62.8 149 28.9
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.7e-08 62.8 146 30.1
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.5e-08 62.4 64 42.2
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 4.5e-08 62.0 144 29.2
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 4.5e-08 62.0 153 31.4
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 7.7e-08 61.2 108 29.6
Duzib248G1413 Durio zibethinus HOM05D020248 ORTHO05D022235 7.7e-08 61.2 125 31.2
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 1.0e-07 60.8 113 28.3
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 1.3e-07 60.5 132 29.5
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.7e-07 60.1 148 27.7
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 2.2e-07 59.7 132 28.0
Manes.03G123318 Manihot esculenta HOM05D006536 ORTHO05D005877 2.2e-07 59.7 135 26.7
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-07 59.7 114 29.8
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 5.0e-07 58.5 148 30.4
Lsat_1_v5_gn_7_108020 Lactuca sativa HOM05D006536 ORTHO05D005877 5.0e-07 58.5 139 32.4
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 1.5e-06 57.0 136 25.7
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.9e-06 56.6 112 28.6
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 1.9e-06 56.6 149 26.8
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.9e-06 56.6 109 25.7
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 2.5e-06 56.2 152 32.2
Potri.011G134400 Populus trichocarpa HOM05D006536 ORTHO05D005877 2.5e-06 56.2 140 30.0
Potri.011G134500 Populus trichocarpa HOM05D006536 ORTHO05D005877 2.5e-06 56.2 140 30.0
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 3.2e-06 55.8 132 29.5
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 4.2e-06 55.5 152 28.3
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 5.5e-06 55.1 144 27.8
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 5.5e-06 55.1 104 27.9
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 7.2e-06 54.7 147 28.6
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 7.2e-06 54.7 133 25.6
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 7.2e-06 54.7 150 28.7
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 7.2e-06 54.7 105 27.6
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 9.4e-06 54.3 150 29.3


User provided reference genes

Program Settings