Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 6.5e-146 520.8 276 100.0
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 1.5e-110 403.3 265 77.0
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 7.5e-110 401.0 268 77.2
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 6.4e-109 397.9 273 74.7
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.8e-108 396.4 264 76.9
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 4.1e-108 395.2 275 74.2
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 5.4e-108 394.8 269 74.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 5.4e-108 394.8 275 74.2
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 9.2e-108 394.0 273 74.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.6e-107 393.3 264 75.4
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.0e-107 392.9 272 74.3
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.5e-107 392.1 276 72.5
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.5e-107 392.1 266 74.8
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.0e-106 390.6 276 72.5
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.3e-106 390.2 266 74.4
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.3e-106 390.2 267 74.2
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.7e-106 389.8 276 71.7
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.7e-106 389.8 264 74.6
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.3e-106 389.4 265 73.2
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 2.3e-106 389.4 267 73.8
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 5.0e-106 388.3 270 74.8
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.6e-106 387.9 276 72.1
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 8.6e-106 387.5 272 74.3
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 8.6e-106 387.5 267 74.2
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 8.6e-106 387.5 267 73.8
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.1e-105 387.1 275 71.3
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.1e-105 387.1 268 72.8
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 5.6e-105 384.8 267 72.7
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 7.3e-105 384.4 264 75.4
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 7.3e-105 384.4 267 74.2
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.2e-104 383.6 269 72.1
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 3.6e-104 382.1 267 73.8
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.1e-103 380.6 272 72.1
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.0e-103 378.6 274 71.9
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 2.2e-101 372.9 274 70.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.2e-101 372.9 264 71.2
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.9e-101 371.7 321 63.6
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 8.3e-101 370.9 270 69.3
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.2e-100 369.0 269 69.9
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 3.2e-100 369.0 264 69.7
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.2e-99 367.1 272 70.2
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.6e-99 366.7 267 69.3
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.0e-99 366.3 269 68.8
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 2.0e-99 366.3 268 70.1
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.5e-99 365.5 269 68.8
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 3.5e-99 365.5 272 69.9
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 6.0e-99 364.8 270 71.1
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.3e-98 363.6 269 68.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 3.0e-98 362.5 272 69.1
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 8.6e-98 360.9 269 69.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.1e-97 360.5 241 78.4
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.5e-97 360.1 267 67.8
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.9e-97 359.8 268 68.7
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.3e-97 359.0 271 69.4
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 4.3e-97 358.6 268 71.3
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 5.6e-97 358.2 274 68.2
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 7.3e-97 357.8 264 70.5
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 9.5e-97 357.5 268 67.9
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.2e-96 357.1 265 67.2
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.6e-96 356.7 243 75.7
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.6e-96 356.7 267 67.0
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.1e-96 356.3 268 67.5
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.8e-96 355.9 269 66.2
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 2.8e-96 355.9 267 67.0
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.4e-95 353.6 264 66.3
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.8e-95 353.2 269 68.4
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 2.3e-95 352.8 267 65.9
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.3e-95 352.8 268 67.2
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-95 352.8 268 67.2
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 3.1e-95 352.4 273 69.6
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.5e-94 350.1 271 67.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.0e-94 349.7 271 68.6
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.4e-94 349.0 275 67.6
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 4.4e-94 348.6 273 68.9
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 7.5e-94 347.8 270 68.5
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.2e-93 346.3 270 67.8
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.2e-93 346.3 270 66.7
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 4.9e-93 345.1 264 67.0
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 8.3e-93 344.4 267 65.5
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.4e-92 343.6 270 66.3
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 3.2e-92 342.4 271 66.4
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 3.2e-92 342.4 263 68.4
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 7.1e-92 341.3 271 66.1
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 2.1e-91 339.7 266 69.2
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.1e-88 329.7 234 71.8
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 4.7e-88 328.6 264 63.6
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 3.1e-87 325.9 274 63.1
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.0e-87 325.5 266 65.8
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 5.2e-87 325.1 289 60.9
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.6e-86 322.8 272 64.0
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 9.9e-86 320.9 225 72.9
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 4.9e-85 318.5 273 60.1
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.9e-84 316.6 266 60.9
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.9e-84 316.6 240 70.8
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.9e-82 308.9 224 70.5
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.5e-81 307.0 258 60.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 5.6e-81 305.1 232 67.7
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 1.1e-79 300.8 238 66.4
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-79 300.8 264 61.7
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.9e-76 290.0 263 60.5
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 7.1e-76 288.1 388 44.8
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.5e-67 259.2 268 54.5
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 2.3e-66 256.5 263 54.8
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.4e-63 247.3 228 57.9
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 7.4e-57 224.9 148 78.4
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.7e-53 213.8 196 63.3
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-52 209.1 138 73.9
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 5.7e-49 198.7 220 53.2
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.2e-46 191.0 183 61.2
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 1.4e-44 184.1 143 65.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 9.4e-44 181.4 217 49.3
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 3.0e-42 176.4 136 61.8
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 7.4e-41 171.8 133 70.7
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.7e-40 169.5 121 73.6
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 2.8e-32 143.3 136 63.2
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 9.4e-28 128.3 119 58.8
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.6e-27 127.5 203 43.8
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.9e-26 122.9 133 58.6
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.7e-24 117.5 80 75.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 1.1e-23 114.8 258 34.9
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.5e-22 109.4 80 72.5
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 4.2e-12 76.3 108 42.6
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 6.8e-10 68.9 48 64.6


User provided reference genes

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