Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 2.8e-109 398.7 209 100.0
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.9e-89 332.8 248 72.2
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 9.4e-89 330.5 249 69.9
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.6e-88 329.7 249 69.5
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.6e-88 329.7 242 72.7
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 3.6e-88 328.6 248 69.8
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 4.7e-88 328.2 249 69.1
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.8e-87 326.2 242 71.9
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.2e-86 323.6 246 70.3
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 6.3e-85 317.8 248 66.5
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.4e-84 316.6 248 65.3
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 2.4e-84 315.8 248 66.5
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.1e-84 315.5 245 66.9
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 9.1e-84 313.9 251 66.5
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.2e-83 313.5 248 64.1
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.6e-83 313.2 249 66.3
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 2.0e-83 312.8 240 68.8
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 2.0e-83 312.8 249 64.7
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 2.7e-83 312.4 243 67.1
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 3.5e-83 312.0 246 67.1
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 5.9e-83 311.2 245 67.3
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 1.0e-82 310.5 246 65.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 1.0e-82 310.5 246 65.0
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.3e-82 310.1 248 63.3
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.3e-82 310.1 245 65.7
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.7e-82 309.7 249 65.5
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.7e-82 309.7 246 65.0
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.3e-82 309.3 242 68.2
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 3.8e-82 308.5 245 66.9
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.8e-82 308.5 246 64.6
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 5.0e-82 308.1 245 65.3
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 8.6e-82 307.4 246 65.9
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.5e-81 306.6 251 62.9
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 1.5e-81 306.6 251 62.9
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 7.2e-81 304.3 246 65.9
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.2e-80 303.5 249 65.5
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.6e-80 303.1 249 66.3
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.6e-80 303.1 246 65.4
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.6e-80 303.1 246 64.2
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.6e-80 303.1 257 61.9
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.8e-80 302.4 242 66.5
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 3.6e-80 302.0 249 61.4
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 3.6e-80 302.0 242 65.7
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 4.7e-80 301.6 242 66.1
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.8e-79 299.7 244 65.2
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.8e-79 299.7 244 65.2
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.3e-79 299.3 246 63.8
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 3.0e-79 298.9 249 64.3
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 4.0e-79 298.5 245 64.1
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 5.2e-79 298.1 246 65.0
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.5e-78 296.6 243 65.0
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 2.0e-78 296.2 242 65.7
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 2.0e-78 296.2 242 64.0
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.6e-78 295.8 249 63.9
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 5.7e-78 294.7 251 61.4
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 5.7e-78 294.7 242 64.5
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 7.5e-78 294.3 249 60.2
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 7.5e-78 294.3 249 60.2
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 7.5e-78 294.3 249 60.2
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 9.8e-78 293.9 245 60.4
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.3e-77 293.5 245 61.2
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.8e-77 292.4 249 63.9
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 3.7e-77 292.0 245 60.8
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 4.9e-77 291.6 252 62.3
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.1e-76 290.4 264 58.3
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.1e-76 290.4 242 64.5
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 4.1e-76 288.5 245 60.4
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 5.4e-76 288.1 245 60.8
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 7.0e-76 287.7 223 68.2
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.7e-75 285.8 245 61.6
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.7e-74 283.1 245 62.9
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 3.9e-74 282.0 246 59.3
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.5e-73 280.0 250 59.6
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.9e-73 279.6 246 61.4
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 9.5e-73 277.3 246 60.2
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.3e-69 266.9 234 59.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 4.9e-69 265.0 240 56.7
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 8.3e-69 264.2 245 58.0
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 7.0e-68 261.2 249 56.2
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 7.8e-67 257.7 179 74.3
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.7e-66 256.5 246 56.1
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.5e-65 253.4 245 56.3
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.5e-65 253.4 245 56.3
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.9e-65 253.1 203 66.5
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 9.5e-65 250.8 207 65.2
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 2.8e-64 249.2 203 65.5
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 6.2e-64 248.1 242 55.0
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 6.8e-63 244.6 203 64.5
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 8.9e-63 244.2 251 55.0
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 2.6e-62 242.7 249 51.8
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.9e-61 239.2 245 53.1
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.9e-61 239.2 213 60.6
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 9.5e-57 224.2 184 66.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.6e-56 223.4 198 57.1
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 8.9e-55 217.6 202 61.4
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 4.9e-53 211.8 194 53.6
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.7e-51 206.1 272 51.1
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.1e-47 194.1 245 48.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 4.0e-47 192.2 242 44.2
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 6.4e-45 184.9 246 45.5
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 6.0e-43 178.3 242 41.7
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 4.3e-41 172.2 238 44.1
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 4.4e-38 162.2 239 39.7
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 2.2e-37 159.8 156 53.8
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.1e-36 157.5 242 36.4
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 5.4e-36 155.2 119 68.1
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.7e-29 133.7 144 49.3
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 3.8e-29 132.5 85 72.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 9.3e-28 127.9 162 48.8
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 1.6e-27 127.1 153 49.0
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 3.5e-27 125.9 153 49.0
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 9.3e-20 101.3 117 51.3
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 7.9e-19 98.2 113 52.2
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 1.9e-17 93.6 116 45.7
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 1.8e-15 87.0 231 28.1
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 7.1e-12 75.1 69 56.5
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 9.7e-09 64.7 110 41.8
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 1.6e-08 63.9 39 69.2
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 6.3e-08 62.0 38 84.2
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.1e-07 61.2 92 42.4


User provided reference genes

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