Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 4.3e-113 411.4 215 100.0
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.5e-65 253.4 209 67.5
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 2.0e-65 253.1 211 68.2
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 3.4e-65 252.3 213 64.3
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 3.4e-65 252.3 212 67.9
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 9.8e-65 250.8 213 63.4
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 6.3e-64 248.1 211 65.9
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 3.1e-63 245.7 209 65.1
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 5.4e-63 245.0 211 64.9
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 1.7e-61 240.0 208 64.9
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 2.3e-61 239.6 210 66.7
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 8.6e-61 237.7 213 62.0
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 8.6e-61 237.7 212 62.7
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.5e-60 236.9 214 63.6
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.9e-60 236.5 212 62.3
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 4.3e-60 235.3 202 63.4
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 4.3e-60 235.3 208 63.0
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 5.6e-60 235.0 205 63.9
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 9.5e-60 234.2 209 62.2
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 9.5e-60 234.2 217 63.1
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 1.2e-59 233.8 166 74.1
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 2.8e-59 232.6 194 67.5
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 2.8e-59 232.6 209 61.7
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.8e-59 232.6 166 73.5
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 2.8e-59 232.6 213 62.0
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 6.1e-59 231.5 216 62.5
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 6.1e-59 231.5 211 62.6
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 8.0e-59 231.1 197 64.0
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 1.8e-58 229.9 187 64.2
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 4.0e-58 228.8 215 61.9
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 5.2e-58 228.4 216 61.1
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 6.8e-58 228.0 212 62.3
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 6.8e-58 228.0 216 61.1
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 8.9e-58 227.6 181 65.2
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.5e-57 226.9 182 70.3
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 2.6e-57 226.1 166 72.9
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 4.4e-57 225.3 165 70.3
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 4.4e-57 225.3 199 60.8
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 5.7e-57 224.9 160 73.1
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 5.7e-57 224.9 156 75.0
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 1.3e-56 223.8 200 64.0
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.3e-56 223.8 217 59.4
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 2.2e-56 223.0 156 73.7
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 2.2e-56 223.0 200 61.5
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 4.9e-56 221.9 183 66.1
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 4.9e-56 221.9 197 63.5
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.1e-55 220.7 225 57.8
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.1e-55 220.7 212 60.8
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 1.4e-55 220.3 212 61.3
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.4e-55 219.5 225 57.3
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.4e-55 219.5 154 75.3
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.2e-55 219.2 244 54.9
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 4.1e-55 218.8 156 73.1
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 9.2e-55 217.6 209 58.4
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.2e-54 217.2 156 72.4
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 1.2e-54 217.2 162 69.8
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.6e-54 216.9 244 54.5
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 2.0e-54 216.5 216 58.8
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.6e-54 215.3 162 72.2
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.0e-53 214.2 209 60.3
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.0e-53 214.2 154 70.1
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 3.0e-53 212.6 159 71.7
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 3.0e-53 212.6 167 70.1
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.9e-53 212.2 212 58.5
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 5.0e-53 211.8 205 59.5
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.6e-53 211.5 153 72.5
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 7.3e-52 208.0 215 59.1
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 9.5e-52 207.6 165 66.1
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 9.5e-52 207.6 183 63.4
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 1.2e-51 207.2 206 58.7
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.6e-51 206.8 215 58.1
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.8e-51 206.1 215 57.7
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 6.2e-51 204.9 205 58.5
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.0e-50 204.1 226 54.9
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 1.4e-50 203.8 215 57.2
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 1.8e-50 203.4 231 55.0
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 1.8e-50 203.4 231 55.0
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 2.3e-50 203.0 167 67.1
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 2.3e-50 203.0 165 65.5
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 4.0e-50 202.2 231 55.0
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 1.5e-49 200.3 145 75.2
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 9.8e-49 197.6 197 59.4
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.3e-48 197.2 163 64.4
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.7e-48 196.8 246 52.8
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 2.9e-48 196.1 148 70.9
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 2.3e-45 186.4 150 64.7
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.9e-45 185.7 221 53.8
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 3.6e-43 179.1 104 88.5
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.1e-42 177.6 142 62.0
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.0e-41 173.3 111 80.2
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 2.6e-41 172.9 121 74.4
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 4.9e-40 168.7 116 76.7
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 8.3e-40 167.9 103 85.4
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 7.1e-39 164.9 97 85.6
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.3e-37 159.8 226 48.2
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 3.0e-37 159.5 136 61.0
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 7.3e-36 154.8 103 75.7
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 4.7e-35 152.1 117 68.4
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 6.2e-35 151.8 125 66.4
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 9.9e-33 144.4 106 70.8
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.1e-31 141.0 156 53.2
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 7.1e-31 138.3 212 45.3
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 9.2e-31 137.9 208 48.1
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.9e-28 130.2 79 83.5
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 8.1e-27 124.8 155 49.7
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 1.8e-26 123.6 140 47.1
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 5.2e-26 122.1 71 90.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 5.2e-26 122.1 71 90.1
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 5.8e-25 118.6 175 43.4
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.7e-22 109.8 139 49.6
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.5e-20 104.0 63 82.5
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.8e-18 97.1 87 56.3
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.6e-17 93.2 82 59.8
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 4.6e-14 82.4 123 36.6
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 4.2e-07 59.3 53 58.5
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 4.2e-07 59.3 53 58.5


User provided reference genes

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