Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1646 Punica granatum HOM05D013472 ORTHO05D015108 1.2e-272 942.6 497 100.0
PGR119G2091 Punica granatum HOM05D013472 ORTHO05D015108 9.0e-247 856.7 497 88.3
PGR142G2288 Punica granatum HOM05D013472 ORTHO05D015108 1.1e-244 849.7 497 87.5
PGR044G2228 Punica granatum HOM05D013472 ORTHO05D015108 7.7e-222 773.9 497 78.9
PGR142G1294 Punica granatum HOM05D013472 ORTHO05D015108 1.0e-218 763.5 497 78.3
PGR031G1522 Punica granatum HOM05D013472 ORTHO05D015108 1.4e-186 656.8 490 66.9
PGR142G0060 Punica granatum HOM05D013472 ORTHO05D015108 4.6e-182 641.7 384 81.8
PGR031G1298 Punica granatum HOM05D013472 ORTHO05D015108 5.6e-172 608.2 497 65.6
PGR042G3387 Punica granatum HOM05D013472 ORTHO05D015108 2.2e-136 490.0 295 86.1
PGR031G0529 Punica granatum HOM05D013472 ORTHO05D015108 2.1e-41 174.5 156 62.2
Sed0006040 Sechium edule HOM05D002881 ORTHO05D010329 6.4e-19 99.8 367 24.0
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 2.1e-17 94.7 394 24.1
TWI56G0801 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 7.9e-17 92.8 318 23.9
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 3.9e-16 90.5 325 25.5
TWI53G0826 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 3.9e-16 90.5 268 25.7
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 5.1e-16 90.1 288 28.5
TWI23G0459 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 1.3e-14 85.5 318 23.3
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 1.4e-13 82.0 340 25.0
PGR042G1687 Punica granatum HOM05D000047 ORTHO05D015108 6.9e-13 79.7 57 56.1
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 6.9e-13 79.7 288 26.7
Thecc.06G098800 Theobroma cacao HOM05D002881 ORTHO05D010329 9.0e-13 79.3 385 24.7
TWI79G0344 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 4.5e-12 77.0 176 29.0
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 8.4e-11 72.8 315 22.5
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 3.2e-10 70.9 236 26.3
Gohir.D13G093150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 4.2e-10 70.5 273 25.3
PGR044G0485 Punica granatum HOM05D000047 ORTHO05D000589 7.1e-10 69.7 89 49.4
Gorai.001G080800 Gossypium raimondii HOM05D002881 ORTHO05D002983 2.3e-08 64.7 227 26.0
Thecc.02G286200 Theobroma cacao HOM05D002881 ORTHO05D002983 2.3e-08 64.7 372 22.3
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 5.1e-08 63.5 213 24.4
MELO3C025327.2 Cucumis melo HOM05D002881 ORTHO05D002983 5.7e-07 60.1 243 24.3
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 1.3e-06 58.9 272 25.7
PGR142G3925 Punica granatum HOM05D000047 ORTHO05D000589 2.8e-06 57.8 38 81.6
Gohir.D01G148150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 4.8e-06 57.0 238 23.9
PGR102G1115 Punica granatum HOM05D000047 ORTHO05D007790 6.3e-06 56.6 63 55.6


User provided reference genes

Program Settings