Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 2.7e-115 418.7 215 100.0
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.2e-49 200.7 226 51.8
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 4.3e-44 182.2 229 50.2
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 1.4e-42 177.2 228 48.2
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 4.0e-42 175.6 221 46.6
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 8.9e-42 174.5 220 45.9
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 7.5e-41 171.4 208 47.1
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 3.7e-40 169.1 227 44.5
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.7e-40 169.1 217 48.4
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 6.4e-40 168.3 218 47.2
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 2.4e-39 166.4 178 52.2
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 2.4e-39 166.4 219 48.9
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 5.4e-39 165.2 218 46.3
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 7.1e-39 164.9 225 46.2
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 7.1e-39 164.9 227 45.4
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 9.2e-39 164.5 209 47.8
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.5e-38 162.5 229 44.5
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 3.5e-38 162.5 216 47.2
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 1.7e-37 160.2 212 46.7
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 1.7e-37 160.2 213 45.5
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.3e-37 159.8 209 46.9
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 2.3e-37 159.8 209 47.4
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 2.3e-37 159.8 220 46.4
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 3.0e-37 159.5 209 47.4
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 5.1e-37 158.7 227 44.5
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 8.6e-37 157.9 209 47.8
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.9e-36 156.8 211 46.9
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 1.9e-36 156.8 209 46.9
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 1.9e-36 156.8 223 43.0
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 7.3e-36 154.8 218 44.5
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 7.3e-36 154.8 219 43.8
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 9.5e-36 154.5 218 45.0
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 9.5e-36 154.5 217 46.1
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.2e-35 154.1 229 43.7
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.2e-35 154.1 211 45.5
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 1.6e-35 153.7 210 41.9
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 8.1e-35 151.4 223 46.2
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 2.3e-34 149.8 222 42.8
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 5.2e-34 148.7 219 42.9
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 5.2e-34 148.7 237 42.2
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 5.2e-34 148.7 207 44.4
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 8.9e-34 147.9 203 44.8
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.2e-33 147.5 223 42.6
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 3.4e-33 146.0 223 43.0
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 5.8e-33 145.2 222 40.1
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 7.6e-33 144.8 209 43.1
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.3e-32 144.1 169 48.5
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.2e-32 143.3 235 42.6
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 2.9e-32 142.9 218 40.8
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 3.8e-32 142.5 213 44.6
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 6.4e-32 141.7 228 41.7
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.1e-31 141.0 214 42.5
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 3.2e-31 139.4 163 50.9
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 3.2e-31 139.4 133 55.6
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 3.2e-31 139.4 236 41.5
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 7.1e-31 138.3 206 43.2
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 7.1e-31 138.3 141 52.5
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 9.2e-31 137.9 113 59.3
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.2e-30 137.5 174 45.4
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 2.7e-30 136.3 261 38.7
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 2.7e-30 136.3 95 67.4
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 4.6e-30 135.6 211 42.7
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 4.6e-30 135.6 217 44.2
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 7.8e-30 134.8 230 40.0
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.0e-29 134.4 211 41.7
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.7e-29 133.7 193 46.1
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 2.3e-29 133.3 211 44.5
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 3.9e-29 132.5 200 40.5
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 5.1e-29 132.1 190 45.8
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 6.6e-29 131.7 92 69.6
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 1.5e-28 130.6 96 62.5
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 2.5e-28 129.8 163 48.5
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 3.3e-28 129.4 144 48.6
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 5.6e-28 128.6 246 36.6
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 9.6e-28 127.9 95 63.2
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 2.8e-27 126.3 183 42.1
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 4.7e-27 125.6 176 46.6
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 6.2e-27 125.2 220 38.2
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.4e-26 124.0 241 35.7
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 3.1e-26 122.9 243 40.3
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 8.9e-26 121.3 171 45.0
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 2.6e-25 119.8 98 58.2
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 2.6e-25 119.8 237 38.0
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 2.6e-25 119.8 220 36.8
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-25 119.4 92 63.0
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 4.4e-25 119.0 208 37.5
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.3e-24 117.5 234 35.5
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.3e-24 117.5 230 35.7
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.7e-24 117.1 97 59.8
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 1.7e-24 117.1 132 47.0
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 4.9e-24 115.5 128 47.7
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 3.2e-23 112.8 87 64.4
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 9.3e-23 111.3 128 46.9
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 9.3e-23 111.3 211 37.0
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 9.3e-23 111.3 211 37.0
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.4e-18 97.4 232 35.8
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 5.8e-17 92.0 146 37.7
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 6.4e-16 88.6 78 59.0
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 3.5e-14 82.8 127 39.4
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 7.9e-14 81.6 210 31.9
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 1.9e-12 77.0 64 54.7
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 7.4e-12 75.1 75 46.7
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 2.7e-06 56.6 183 30.1


User provided reference genes

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