Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.5e-209 732.6 378 100.0
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 6.2e-30 136.0 424 34.4
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 8.9e-29 132.1 434 32.5
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.5e-28 131.3 396 35.6
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 8.3e-27 125.6 403 32.8
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.5e-25 120.2 409 33.0
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 3.5e-25 120.2 407 32.9
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 7.8e-25 119.0 410 32.0
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 1.3e-24 118.2 403 33.5
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.1e-23 115.2 439 30.8
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.5e-23 114.0 461 31.0
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.3e-23 113.2 435 33.1
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 4.3e-23 113.2 443 30.5
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 2.8e-22 110.5 435 31.5
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.7e-22 109.8 440 31.1
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 4.7e-22 109.8 416 32.5
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.1e-21 108.6 443 31.2
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 1.1e-21 108.6 294 34.7
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.1e-21 108.6 440 30.5
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 2.4e-21 107.5 322 33.9
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 3.1e-21 107.1 453 29.6
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 4.0e-21 106.7 446 30.9
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.0e-21 106.7 447 31.1
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.4e-20 103.6 407 31.9
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 5.8e-20 102.8 433 32.6
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 7.6e-20 102.4 441 29.0
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 9.9e-20 102.1 446 30.7
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 1.3e-19 101.7 406 30.8
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.1e-18 98.6 374 30.5
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.2e-18 97.1 416 30.5
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 9.2e-18 95.5 436 30.7
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.6e-17 94.7 388 30.2
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.6e-17 94.7 397 30.5
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 1.6e-17 94.7 457 30.0
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 3.5e-17 93.6 384 31.0
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 3.5e-17 93.6 437 30.7
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 6.0e-17 92.8 421 30.9
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 1.0e-16 92.0 414 29.2
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 1.3e-16 91.7 386 32.1
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.7e-16 91.3 431 30.6
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.3e-16 90.9 435 30.1
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 3.0e-16 90.5 396 31.8
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 8.1e-14 82.4 408 28.7
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.4e-13 80.9 241 33.2
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.4e-13 80.9 455 27.3
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 4.0e-13 80.1 438 28.5
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.0e-13 80.1 412 29.4
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 5.2e-13 79.7 268 32.8
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 5.2e-13 79.7 406 28.6
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 6.9e-13 79.3 435 30.8
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 6.9e-13 79.3 438 27.4
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 6.9e-13 79.3 422 26.5
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 1.2e-12 78.6 365 27.9
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.2e-12 78.6 332 28.0
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 2.0e-12 77.8 359 28.4
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.0e-12 77.8 419 28.9
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 2.6e-12 77.4 264 31.8
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 2.6e-12 77.4 390 29.7
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 7.6e-12 75.9 448 29.2
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 1.3e-11 75.1 433 27.5
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.9e-11 73.9 352 31.0
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 4.9e-11 73.2 364 28.6
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 4.9e-11 73.2 363 27.3
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 6.4e-11 72.8 445 28.5
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 8.4e-11 72.4 394 27.9
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.1e-10 72.0 416 25.5
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 4.2e-10 70.1 448 26.8
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 5.4e-10 69.7 421 29.0
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 5.4e-10 69.7 429 27.3
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 9.3e-10 68.9 368 27.7
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.2e-09 68.6 453 27.4
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 1.6e-09 68.2 409 29.3
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.1e-09 67.8 438 27.4
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 2.7e-09 67.4 426 27.2
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 3.5e-09 67.0 337 28.8
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 4.6e-09 66.6 443 27.5
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 6.0e-09 66.2 427 28.3
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 7.8e-09 65.9 423 29.6
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 1.0e-08 65.5 391 28.6
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.3e-08 65.1 358 28.2
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.3e-08 64.3 436 27.1
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 2.3e-08 64.3 473 27.3
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 5.1e-08 63.2 416 26.9
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 6.6e-08 62.8 382 27.5
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 6.6e-08 62.8 341 28.2
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 8.7e-08 62.4 417 25.7
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.1e-07 62.0 430 27.9
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 1.5e-07 61.6 439 26.2
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.9e-07 61.2 291 29.9
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 1.9e-07 61.2 446 27.1
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.5e-07 60.8 224 29.9
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.3e-07 60.5 331 29.6
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.3e-07 60.1 392 26.3
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 5.6e-07 59.7 397 27.5
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.6e-07 59.7 331 29.6
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 9.6e-07 58.9 363 28.1
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 9.6e-07 58.9 245 29.4
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 9.6e-07 58.9 397 28.2
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 2.8e-06 57.4 478 27.2
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 3.6e-06 57.0 116 35.3
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 6.2e-06 56.2 372 28.0
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 8.1e-06 55.8 226 29.6


User provided reference genes

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