Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 1.4e-271 939.1 507 100.0
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 5.9e-145 518.5 514 59.9
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 5.9e-145 518.5 523 60.8
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 3.8e-144 515.8 515 59.2
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 8.0e-142 508.1 510 59.8
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 5.4e-138 495.4 518 57.9
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 1.5e-135 487.3 504 59.7
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.9e-135 486.9 528 58.5
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 9.5e-135 484.6 519 55.5
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 1.0e-133 481.1 534 58.4
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.4e-133 480.7 523 56.2
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.4e-132 476.1 530 55.7
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 5.8e-132 475.3 545 54.9
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 7.5e-132 474.9 537 56.1
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 1.7e-131 473.8 533 55.3
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.4e-130 469.9 531 55.0
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 9.2e-130 468.0 531 55.0
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.0e-128 464.5 531 55.0
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.0e-128 464.5 530 54.5
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.3e-128 464.2 530 55.7
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 3.3e-127 459.5 519 56.1
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 7.3e-127 458.4 521 55.5
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.6e-126 457.2 518 55.8
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 4.7e-126 455.7 518 55.8
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 6.2e-126 455.3 502 56.4
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.1e-125 454.5 528 55.3
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 5.2e-125 452.2 512 54.9
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 6.8e-125 451.8 541 55.8
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 1.2e-124 451.1 531 54.4
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 1.3e-123 447.6 506 55.3
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.2e-123 446.8 532 53.2
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.7e-123 446.0 514 54.9
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 4.9e-123 445.7 516 54.8
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.1e-122 444.5 528 54.4
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 1.9e-122 443.7 526 55.7
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 3.2e-122 443.0 524 55.3
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 1.2e-121 441.0 524 54.8
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 2.7e-121 439.9 488 55.9
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 4.6e-121 439.1 524 54.2
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 3.0e-120 436.4 604 49.5
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 3.0e-120 436.4 511 54.2
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 3.9e-120 436.0 514 52.5
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.6e-120 435.3 514 53.9
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.5e-119 434.1 548 54.0
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 5.6e-119 432.2 489 55.4
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 3.6e-118 429.5 544 53.7
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 8.1e-118 428.3 515 54.4
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 1.1e-117 427.9 519 53.0
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 2.3e-117 426.8 521 52.2
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.1e-117 426.4 533 52.0
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 5.2e-117 425.6 511 51.7
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 5.2e-117 425.6 542 53.0
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 2.0e-116 423.7 518 53.7
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 2.6e-116 423.3 510 54.7
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 7.6e-116 421.8 535 52.7
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 7.6e-116 421.8 509 50.5
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 2.2e-115 420.2 487 54.0
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 2.9e-115 419.9 509 50.3
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 8.4e-115 418.3 516 52.5
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 1.1e-114 417.9 506 53.0
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 3.2e-114 416.4 531 51.4
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 3.5e-113 412.9 499 51.9
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 7.8e-113 411.8 516 51.6
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 2.3e-112 410.2 515 52.2
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 3.0e-112 409.8 524 52.3
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 3.9e-112 409.5 523 51.4
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 1.9e-111 407.1 521 49.5
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 5.6e-111 405.6 518 49.8
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 5.6e-111 405.6 522 49.0
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 5.6e-111 405.6 521 51.1
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.2e-110 404.4 532 51.1
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 2.1e-110 403.7 522 49.2
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 2.1e-110 403.7 498 50.0
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 2.1e-110 403.7 515 50.5
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 2.8e-110 403.3 516 49.6
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 3.6e-110 402.9 525 47.4
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 4.7e-110 402.5 522 49.0
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 4.7e-110 402.5 522 51.5
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 1.8e-109 400.6 498 49.8
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 3.1e-109 399.8 506 51.2
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 6.8e-109 398.7 529 49.7
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 2.6e-108 396.7 516 50.0
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 2.6e-108 396.7 497 50.9
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.6e-108 396.7 511 50.1
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 2.6e-108 396.7 524 50.6
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 9.9e-108 394.8 516 48.8
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 1.3e-107 394.4 525 51.2
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 1.7e-107 394.0 501 49.3
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 2.2e-107 393.7 543 51.0
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 4.9e-107 392.5 515 48.9
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 6.4e-107 392.1 515 49.3
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 1.9e-106 390.6 549 48.6
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 2.4e-106 390.2 515 49.9
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 3.2e-106 389.8 534 51.3
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 5.4e-106 389.0 512 48.0
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 7.1e-106 388.7 512 47.9
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 2.7e-105 386.7 520 49.0
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 1.3e-104 384.4 512 47.3
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 1.7e-104 384.0 512 47.3
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.0e-104 383.3 505 48.9
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 6.6e-104 382.1 512 47.1
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 2.5e-103 380.2 535 49.7
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 4.8e-102 375.9 507 49.7
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 1.1e-101 374.8 509 50.7
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 5.3e-101 372.5 512 49.0
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 6.4e-99 365.5 524 49.6
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 3.2e-98 363.2 488 47.5
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 1.3e-96 357.8 514 46.1
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 9.6e-95 351.7 415 54.0
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 2.8e-94 350.1 518 47.7
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 6.2e-94 349.0 561 46.7
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 6.2e-94 349.0 413 55.4
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 8.1e-94 348.6 517 46.8
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 4.0e-93 346.3 526 47.7
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.2e-92 344.7 496 48.8
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 2.0e-92 344.0 358 55.0
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 4.5e-92 342.8 524 46.8
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 9.9e-92 341.7 530 44.0
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 2.2e-91 340.5 365 58.4
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 4.2e-90 336.3 511 44.4
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 4.6e-89 332.8 516 45.0
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 1.3e-88 331.3 461 49.7
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 8.7e-88 328.6 541 45.8
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 4.5e-84 316.2 363 54.5
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.6e-81 307.8 526 43.0
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.3e-80 303.9 519 42.6
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.1e-79 301.6 495 43.4
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 4.3e-79 299.7 515 42.3
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.8e-78 297.0 522 41.6
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 3.1e-77 293.5 483 43.7
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.2e-75 287.3 531 41.8
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 1.1e-71 275.0 450 42.4
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.8e-70 270.4 500 42.8
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 6.3e-70 269.2 376 47.1
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 2.5e-66 257.3 582 35.1
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 7.4e-63 245.7 294 54.4
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 2.6e-60 237.3 262 56.9
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 1.7e-59 234.6 384 38.3
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.2e-57 228.4 386 40.9
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 2.3e-56 224.2 279 49.5
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 8.2e-54 215.7 379 38.8
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.1e-53 215.3 379 39.6
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 4.1e-53 213.4 379 39.6
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 2.2e-51 207.6 308 44.8
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 3.8e-51 206.8 385 40.0
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 6.5e-51 206.1 232 52.2
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 2.1e-49 201.1 446 37.2
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 4.7e-49 199.9 459 37.3
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 1.7e-46 191.4 526 32.7
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.5e-39 168.3 165 61.8
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 1.7e-35 154.8 245 48.6
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 1.1e-34 152.1 532 32.3
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 2.7e-33 147.5 193 51.8
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 4.0e-32 143.7 563 31.3
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 4.4e-31 140.2 191 48.7
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.7e-30 138.3 271 41.3
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 4.5e-28 130.2 285 35.8
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 2.5e-26 124.4 185 44.3
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 5.6e-26 123.2 202 41.6
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 9.5e-26 122.5 481 30.6
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 8.0e-25 119.4 127 58.3
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 1.4e-24 118.6 231 39.0
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.0e-24 117.5 263 35.7
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 1.6e-20 105.1 142 43.7
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 1.0e-19 102.4 203 36.0
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 4.3e-18 97.1 108 52.8
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 9.5e-18 95.9 263 35.0
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.1e-17 94.7 120 47.5
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 8.9e-16 89.4 88 54.5
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.1e-13 82.4 112 37.5
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 2.7e-12 77.8 72 52.8
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 8.6e-11 72.8 58 65.5
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 5.2e-08 63.5 49 65.3
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 1.7e-06 58.5 137 42.3


User provided reference genes

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