Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 1.4e-90 336.3 169 100.0
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 4.2e-63 245.0 159 76.1
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 9.4e-63 243.8 159 78.6
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 1.2e-62 243.4 158 78.5
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 4.7e-62 241.5 162 75.3
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 3.0e-61 238.8 155 74.2
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 3.9e-61 238.4 152 74.3
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 3.9e-61 238.4 160 73.1
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 3.9e-61 238.4 152 76.3
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 5.2e-61 238.0 157 72.6
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 8.8e-61 237.3 152 75.7
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 1.1e-60 236.9 156 75.0
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 2.6e-60 235.7 155 72.9
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 4.4e-60 235.0 160 72.5
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 5.7e-60 234.6 160 73.8
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 5.7e-60 234.6 158 73.4
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 7.4e-60 234.2 154 75.3
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 9.7e-60 233.8 157 74.5
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 9.7e-60 233.8 158 70.9
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 1.3e-59 233.4 157 76.4
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 1.7e-59 233.0 155 74.8
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 2.2e-59 232.6 156 73.7
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 2.8e-59 232.3 154 74.0
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 2.8e-59 232.3 157 74.5
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 2.8e-59 232.3 154 75.3
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 3.7e-59 231.9 168 67.3
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 4.8e-59 231.5 152 72.4
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 4.8e-59 231.5 159 70.4
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 6.3e-59 231.1 159 72.3
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 6.3e-59 231.1 153 74.5
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 8.2e-59 230.7 159 70.4
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 8.2e-59 230.7 159 70.4
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 8.2e-59 230.7 157 73.2
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 8.2e-59 230.7 152 71.1
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 1.4e-58 229.9 152 74.3
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 1.8e-58 229.6 157 73.2
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 1.8e-58 229.6 157 70.7
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 1.8e-58 229.6 154 72.7
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 2.4e-58 229.2 142 77.5
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 3.1e-58 228.8 152 71.7
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 4.1e-58 228.4 158 70.3
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 5.3e-58 228.0 156 71.8
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 7.0e-58 227.6 159 69.8
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 9.1e-58 227.3 152 73.7
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 9.1e-58 227.3 156 72.4
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 1.6e-57 226.5 143 76.2
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 1.6e-57 226.5 143 75.5
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 1.6e-57 226.5 152 73.0
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 2.6e-57 225.7 171 69.0
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 2.6e-57 225.7 148 75.0
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 2.6e-57 225.7 159 69.2
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 4.5e-57 224.9 157 69.4
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 4.5e-57 224.9 157 69.4
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 4.5e-57 224.9 155 69.7
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 4.5e-57 224.9 162 70.4
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 5.9e-57 224.6 154 70.8
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 7.7e-57 224.2 163 68.7
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 1.0e-56 223.8 165 63.6
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 2.2e-56 222.6 137 77.4
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 2.2e-56 222.6 135 77.0
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 3.8e-56 221.9 154 70.1
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 3.8e-56 221.9 143 72.0
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 3.8e-56 221.9 159 69.2
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 8.5e-56 220.7 156 66.7
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 8.5e-56 220.7 154 71.4
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 8.5e-56 220.7 154 71.4
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 8.5e-56 220.7 154 71.4
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 1.1e-55 220.3 154 69.5
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 1.5e-55 219.9 156 67.3
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 1.5e-55 219.9 155 69.7
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 1.9e-55 219.5 139 72.7
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 4.2e-55 218.4 164 67.7
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 5.5e-55 218.0 141 70.9
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 5.5e-55 218.0 141 70.9
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 5.5e-55 218.0 141 70.9
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 5.5e-55 218.0 141 70.9
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 5.5e-55 218.0 141 70.9
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 5.5e-55 218.0 147 72.1
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 7.2e-55 217.6 149 67.8
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 7.2e-55 217.6 161 64.6
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 9.4e-55 217.2 153 66.0
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 1.2e-54 216.9 166 62.0
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 1.6e-54 216.5 141 70.2
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 1.6e-54 216.5 157 69.4
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 2.1e-54 216.1 161 67.7
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 2.7e-54 215.7 157 65.6
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 6.1e-54 214.5 157 65.6
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 6.1e-54 214.5 138 73.2
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 6.1e-54 214.5 144 71.5
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 8.0e-54 214.2 157 65.6
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 8.0e-54 214.2 157 65.6
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.0e-54 214.2 141 73.8
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.0e-53 213.8 156 68.6
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.4e-53 213.4 141 71.6
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.3e-53 212.6 155 69.0
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 3.0e-53 212.2 157 64.3
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 4.0e-53 211.8 157 64.3
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 5.2e-53 211.5 141 72.3
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.2e-53 211.5 141 72.3
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 5.7e-52 208.0 175 60.6
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 5.7e-52 208.0 138 71.7
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 9.7e-52 207.2 138 70.3
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 1.3e-51 206.8 148 67.6
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.1e-50 202.2 184 58.7
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 3.1e-50 202.2 162 61.1
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.3e-50 201.4 184 59.2
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.6e-49 199.9 189 57.1
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 2.7e-49 199.1 156 61.5
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 2.7e-49 199.1 134 69.4
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 7.7e-49 197.6 135 67.4
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 4.2e-47 191.8 119 77.3
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 1.2e-46 190.3 154 61.7
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 5.7e-44 181.4 103 80.6
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 1.3e-43 180.3 159 61.6
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 1.3e-43 180.3 97 85.6
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 5.0e-40 168.3 151 55.6
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 1.3e-35 153.7 155 49.7
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 1.7e-35 153.3 141 54.6
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 5.4e-34 148.3 83 83.1
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-22 110.2 83 60.2
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 2.1e-22 109.8 73 69.9
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 2.1e-14 83.2 80 52.5
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 3.4e-12 75.9 140 35.7
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 1.3e-11 73.9 167 33.5


User provided reference genes

Program Settings