Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1219 Punica granatum HOM05D004965 ORTHO05D004401 1.5e-65 252.7 129 100.0
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 2.2e-11 72.8 93 50.5
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 4.9e-11 71.6 93 48.4
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.1e-10 70.5 102 48.0
Prupe.3G275200 Prunus persica HOM05D004965 ORTHO05D004401 1.1e-10 70.5 102 47.1
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.1e-10 70.5 93 46.2
FAN02G2636 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.4e-10 69.3 101 43.6
FAN05G5108 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.4e-10 69.3 101 43.6
RcHm_v2.0_Chr2g0169701 Rosa chinensis HOM05D004965 ORTHO05D004401 2.4e-10 69.3 93 45.2
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 3.2e-10 68.9 98 46.9
FAN14G2761 Fragaria x ananassa HOM05D004965 ORTHO05D004401 3.2e-10 68.9 98 42.9
Lj2g0009068 Lotus japonicus HOM05D004965 ORTHO05D004401 3.2e-10 68.9 102 41.2
FvH4_6g49680 Fragaria vesca HOM05D004965 ORTHO05D004401 4.1e-10 68.6 101 43.6
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 5.4e-10 68.2 101 43.6
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 5.4e-10 68.2 100 42.0
MD09G1042500 Malus domestica HOM05D004965 ORTHO05D004401 9.2e-10 67.4 101 45.5
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 1.2e-09 67.0 71 53.5
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.6e-09 66.6 102 45.1
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 1.6e-09 66.6 90 50.0
FAN09G1906 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.0e-09 66.2 101 42.6
Glyma.13G067000 Glycine max HOM05D004965 ORTHO05D004401 3.5e-09 65.5 102 41.2
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 7.8e-09 64.3 101 43.6
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 7.8e-09 64.3 100 45.0
Duzib187G0871 Durio zibethinus HOM05D004965 ORTHO05D004401 1.0e-08 63.9 54 59.3
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 1.7e-08 63.2 101 43.6
Lalb_Chr06g0176581 Lupinus albus HOM05D004965 ORTHO05D004401 1.7e-08 63.2 101 37.6
Phvul.004G023800 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 1.7e-08 63.2 116 37.1
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 1.7e-08 63.2 102 43.1
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.0e-08 62.4 122 40.2
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 3.0e-08 62.4 100 42.0
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.0e-08 62.4 93 44.1
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 5.0e-08 61.6 93 37.6
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 5.0e-08 61.6 93 41.9
Eucgr.J02154 Eucalyptus grandis HOM05D004965 ORTHO05D004401 6.6e-08 61.2 102 43.1
Glyma.19G017400 Glycine max HOM05D004965 ORTHO05D004401 6.6e-08 61.2 102 38.2
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 6.6e-08 61.2 100 41.0
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 8.6e-08 60.8 100 44.0
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.5e-07 60.1 32 78.1
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 1.9e-07 59.7 33 78.8
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.9e-07 59.7 122 39.3
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.9e-07 59.7 122 39.3
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 2.5e-07 59.3 59 50.8
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 2.5e-07 59.3 96 45.8
CANSAT64G1053 Cannabis sativa HOM05D004965 ORTHO05D004401 3.3e-07 58.9 111 37.8
PGSC0003DMG400022630 Solanum tuberosum HOM05D004965 ORTHO05D004401 3.3e-07 58.9 92 41.3
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 3.3e-07 58.9 92 39.1
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 5.6e-07 58.2 75 46.7
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 7.3e-07 57.8 31 80.6
arahy.Tifrunner.gnm1.ann1.6A0KRF Arachis hypogaea HOM05D004965 ORTHO05D004401 7.3e-07 57.8 96 38.5
arahy.Tifrunner.gnm1.ann1.E1G8VG Arachis hypogaea HOM05D004965 ORTHO05D004401 7.3e-07 57.8 96 38.5
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 7.3e-07 57.8 92 41.3
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 7.3e-07 57.8 94 40.4
Lalb_Chr21g0319141 Lupinus albus HOM05D004965 ORTHO05D004401 7.3e-07 57.8 101 34.7
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 9.5e-07 57.4 32 78.1
TPR.G32595 Trifolium pratense HOM05D004965 ORTHO05D004401 9.5e-07 57.4 101 36.6
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 2.1e-06 56.2 67 50.7
Psat1g077560 Pisum sativum HOM05D004965 ORTHO05D004401 2.8e-06 55.8 102 38.2
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 2.8e-06 55.8 35 71.4
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.6e-06 55.5 30 80.0
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 3.6e-06 55.5 66 48.5
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 3.6e-06 55.5 110 37.3
Solyc05g006610.4 Solanum lycopersicum HOM05D004965 ORTHO05D004401 3.6e-06 55.5 56 46.4
Sopen05g002550 Solanum pennellii HOM05D004965 ORTHO05D004401 3.6e-06 55.5 56 46.4
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 4.7e-06 55.1 98 34.7
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 4.7e-06 55.1 30 76.7
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 4.7e-06 55.1 30 76.7
SalBow8G5011 Salvia bowleyana HOM05D004965 ORTHO05D004401 4.7e-06 55.1 30 73.3
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 6.2e-06 54.7 95 40.0
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 6.2e-06 54.7 53 50.9
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 6.2e-06 54.7 108 39.8
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 8.1e-06 54.3 33 69.7


User provided reference genes

Program Settings