Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 0.0e+00 1157.1 580 100.0
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 2.3e-185 652.9 602 56.8
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 1.7e-183 646.7 602 56.1
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 2.8e-183 646.0 608 57.2
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 2.5e-179 632.9 602 56.3
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 1.1e-176 624.0 621 53.6
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 5.7e-176 621.7 608 53.9
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 8.2e-175 617.8 608 55.8
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 1.8e-174 616.7 610 54.8
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.2e-173 614.0 602 55.0
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 5.9e-173 611.7 601 54.6
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 1.9e-171 606.7 608 53.6
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 1.9e-171 606.7 605 55.2
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.2e-171 605.5 605 54.4
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 3.0e-169 599.4 605 54.4
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 1.4e-166 590.5 604 53.5
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 3.2e-163 579.3 614 52.3
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 2.7e-162 576.2 529 59.4
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 1.0e-161 574.3 605 50.6
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 3.4e-160 569.3 555 54.6
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 7.5e-160 568.2 605 50.9
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 3.7e-159 565.8 622 50.6
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 1.0e-156 557.8 615 50.7
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.7e-156 557.0 601 50.7
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 2.2e-156 556.6 607 50.6
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 8.5e-156 554.7 570 53.5
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 6.1e-154 548.5 607 50.7
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 1.0e-153 547.7 601 50.2
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 3.4e-152 542.7 602 50.0
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.4e-150 537.3 649 47.1
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 7.0e-150 535.0 624 47.6
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 2.0e-149 533.5 609 47.6
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 2.9e-148 529.6 605 49.8
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 3.8e-148 529.3 608 49.3
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 1.5e-147 527.3 605 49.6
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 1.5e-147 527.3 605 49.6
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 3.3e-147 526.2 478 57.9
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 4.2e-147 525.8 604 47.8
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 7.2e-147 525.0 608 50.2
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 6.1e-146 521.9 604 47.5
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 6.1e-146 521.9 609 47.8
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 5.2e-145 518.8 670 46.6
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.5e-144 517.3 607 49.1
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 1.5e-144 517.3 608 49.0
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 3.4e-144 516.2 615 48.0
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 7.5e-144 515.0 623 48.2
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 1.7e-143 513.8 607 47.9
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 2.2e-143 513.5 608 48.4
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 2.8e-143 513.1 627 47.7
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 1.1e-142 511.1 612 48.9
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 4.1e-142 509.2 627 47.4
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 7.8e-141 505.0 618 47.1
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 3.9e-140 502.7 606 47.7
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 6.6e-140 501.9 623 47.7
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 1.5e-139 500.7 635 46.8
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 1.2e-138 497.7 627 46.4
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 3.1e-137 493.0 637 46.5
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 8.9e-137 491.5 624 46.0
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.5e-136 490.7 621 45.7
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 3.4e-136 489.6 625 46.6
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 3.4e-136 489.6 621 46.4
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 9.8e-136 488.0 620 45.3
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 6.4e-135 485.3 624 45.5
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.4e-134 484.2 609 47.3
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 1.4e-134 484.2 638 45.6
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 2.4e-134 483.4 626 46.5
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.0e-132 478.0 648 44.0
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 1.3e-132 477.6 643 45.1
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 1.2e-130 471.1 623 45.1
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 1.2e-128 464.5 605 44.3
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 1.3e-127 461.1 709 42.0
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 1.9e-123 447.2 621 44.3
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 6.8e-121 438.7 616 42.7
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 4.4e-120 436.0 484 52.5
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 6.2e-114 415.6 647 40.2
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 1.7e-111 407.5 486 46.9
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 1.1e-110 404.8 484 48.8
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 2.7e-109 400.2 607 41.2
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.1e-107 394.8 394 54.6
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 6.9e-105 385.6 415 52.3
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.3e-92 344.7 361 50.1
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 8.7e-92 342.0 318 56.0
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 5.3e-89 332.8 316 54.7
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 3.8e-87 326.6 408 46.6
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 4.8e-82 309.7 318 52.8
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 1.3e-76 291.6 277 53.4
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 1.6e-74 284.6 275 54.2
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 2.4e-73 280.8 292 51.7
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.4e-57 228.4 276 48.6
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 1.3e-55 221.9 224 52.2
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 4.2e-54 216.9 224 52.2
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 2.8e-50 204.1 599 28.7
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 5.3e-49 199.9 569 29.9
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 1.6e-48 198.4 325 37.5
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 3.2e-46 190.7 304 41.1
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 1.6e-45 188.3 253 44.3
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 6.3e-42 176.4 211 46.0
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 2.4e-41 174.5 382 34.6
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 2.8e-29 134.4 170 51.2
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 4.9e-26 123.6 149 45.0
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 1.4e-25 122.1 159 45.3
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 2.7e-24 117.9 559 26.5
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 5.9e-24 116.7 150 47.3
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 7.8e-24 116.3 354 30.5
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.0e-23 115.9 354 28.0
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 1.5e-22 112.1 125 48.0
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 2.5e-22 111.3 121 50.4
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 5.6e-22 110.2 150 46.0
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 6.2e-21 106.7 155 40.0
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.4e-20 105.5 116 47.4
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 3.1e-20 104.4 433 24.5
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 4.0e-20 104.0 113 46.9
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 8.3e-18 96.3 101 48.5
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 1.4e-17 95.5 124 45.2
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 4.1e-17 94.0 196 35.2
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 3.5e-16 90.9 129 35.7
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 6.0e-16 90.1 129 35.7
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 2.5e-14 84.7 113 41.6
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 1.3e-10 72.4 92 42.4
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 4.1e-09 67.4 92 48.9


User provided reference genes

Program Settings