Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 3.4e-205 718.0 334 100.0
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.6e-162 576.2 318 81.4
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 4.6e-162 574.7 323 78.6
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 1.0e-161 573.5 323 78.6
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.0e-161 573.5 320 80.3
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 5.1e-161 571.2 320 80.0
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 5.1e-161 571.2 323 79.6
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.1e-161 571.2 323 79.6
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 5.1e-161 571.2 323 78.6
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 8.7e-161 570.5 323 79.9
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.6e-160 567.8 323 79.3
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 7.3e-160 567.4 323 79.3
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 6.2e-159 564.3 323 78.0
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 8.1e-159 563.9 323 77.7
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 1.4e-158 563.1 320 78.8
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.8e-158 562.8 320 79.1
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 2.6e-157 558.9 319 79.3
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.3e-156 556.6 318 79.6
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 1.7e-156 556.2 318 78.9
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 2.2e-156 555.8 318 79.6
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 3.8e-156 555.1 321 77.9
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 4.9e-156 554.7 318 78.0
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.1e-155 553.5 318 77.0
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 2.4e-155 552.4 323 75.5
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 3.2e-155 552.0 312 76.6
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 3.2e-155 552.0 322 77.3
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.1e-154 549.3 321 76.3
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.5e-154 548.5 320 75.9
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 1.0e-153 547.0 319 77.7
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.3e-153 546.6 311 79.1
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.3e-153 546.6 329 75.4
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 2.3e-153 545.8 324 76.2
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 3.9e-153 545.0 321 78.2
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.1e-153 544.7 320 76.6
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 5.1e-153 544.7 319 76.5
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.5e-152 543.1 320 75.6
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.9e-152 542.7 320 76.6
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 7.3e-152 540.8 316 76.9
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 9.6e-152 540.4 318 76.7
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.3e-151 540.0 319 75.5
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.3e-151 540.0 314 77.7
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 1.6e-151 539.7 313 75.7
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 2.8e-151 538.9 314 77.4
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 2.8e-151 538.9 320 76.9
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 4.8e-151 538.1 319 75.2
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 6.2e-151 537.7 321 76.6
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.1e-150 537.0 324 73.1
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.4e-150 536.6 320 75.6
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 1.4e-150 536.6 319 74.9
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.8e-150 536.2 318 75.5
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.4e-150 535.8 313 74.8
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.4e-150 535.8 318 76.1
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 3.1e-150 535.4 319 74.0
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 4.0e-150 535.0 319 73.7
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 4.0e-150 535.0 321 75.7
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.0e-150 535.0 318 76.1
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 5.3e-150 534.6 313 74.4
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.2e-149 533.5 319 74.3
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.2e-149 533.5 305 79.7
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.4e-149 531.9 321 75.4
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 4.5e-149 531.6 320 75.3
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 4.5e-149 531.6 323 74.6
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 5.8e-149 531.2 333 72.7
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 1.3e-148 530.0 319 73.7
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.9e-148 528.9 312 76.9
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 2.9e-148 528.9 323 73.7
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 4.9e-148 528.1 307 77.9
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 6.4e-148 527.7 319 74.3
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-147 526.9 318 76.1
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.9e-147 526.2 317 73.5
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.9e-147 526.2 326 73.9
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.9e-147 526.2 318 74.5
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.2e-147 525.0 320 75.3
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 4.2e-147 525.0 319 73.0
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 9.3e-147 523.9 320 73.8
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.1e-146 522.7 318 74.2
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 2.1e-146 522.7 318 74.2
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 2.1e-146 522.7 320 75.0
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.6e-146 521.5 318 73.9
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 4.6e-146 521.5 311 75.9
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 7.9e-146 520.8 313 73.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.0e-145 520.4 307 76.2
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 1.0e-145 520.4 318 73.6
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.8e-145 519.6 318 73.6
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 1.8e-145 519.6 322 74.8
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 3.0e-145 518.8 321 74.5
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 8.7e-145 517.3 319 73.7
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.5e-144 516.5 317 71.6
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 5.6e-144 514.6 320 73.8
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.6e-144 514.6 318 72.6
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 7.4e-144 514.2 318 73.0
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.3e-143 513.5 319 71.5
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.8e-143 511.5 309 73.5
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 8.1e-143 510.8 318 70.1
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 8.1e-143 510.8 320 71.9
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.0e-142 508.4 318 72.0
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 6.9e-142 507.7 320 72.2
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.2e-141 506.9 301 76.4
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.5e-141 505.0 314 71.3
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.2e-140 502.7 301 75.7
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.9e-140 501.5 306 73.2
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.1e-139 500.4 320 67.5
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.4e-139 500.0 303 71.9
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 2.5e-139 499.2 315 70.8
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 4.2e-139 498.4 303 71.9
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 7.1e-139 497.7 303 71.9
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.7e-138 495.7 320 69.7
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 3.5e-138 495.4 303 71.6
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 3.5e-138 495.4 303 71.6
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.3e-137 493.4 318 71.7
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 3.0e-137 492.3 303 71.0
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 4.3e-136 488.4 304 71.4
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.7e-136 488.0 304 71.1
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.7e-135 485.3 318 66.0
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 6.3e-135 484.6 303 69.3
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 8.2e-135 484.2 304 71.1
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.1e-134 483.8 295 72.9
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 1.4e-134 483.4 316 72.5
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 6.9e-134 481.1 304 71.1
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.5e-133 479.9 318 69.5
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 5.0e-132 474.9 302 67.9
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 1.1e-131 473.8 305 67.5
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.9e-128 463.0 272 75.0
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 2.5e-128 462.6 316 68.4
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 6.3e-127 458.0 304 68.8
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.4e-126 456.1 313 64.9
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 5.3e-126 454.9 289 70.6
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 2.5e-123 446.0 320 62.8
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.1e-121 438.3 294 69.7
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.3e-119 433.7 312 63.8
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 6.3e-119 431.4 324 60.2
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.4e-118 429.5 307 60.6
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.1e-115 420.6 306 61.1
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.9e-114 414.5 317 61.8
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 7.9e-114 414.5 317 61.8
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 6.3e-111 404.8 319 55.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 2.1e-106 389.8 227 76.7
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.4e-105 387.1 296 64.2
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.4e-105 387.1 305 57.0
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.0e-104 383.3 218 76.6
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 2.4e-102 376.3 307 58.3
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 4.5e-93 345.5 315 51.1
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.3e-84 317.4 274 57.7
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-75 287.7 181 73.5
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.8e-72 275.4 307 48.5
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-62 243.8 269 49.1
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 7.1e-54 215.3 134 76.1
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.1e-50 203.8 128 68.8
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.9e-47 192.6 113 76.1
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.7e-44 184.1 315 34.6
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 4.2e-38 162.9 333 31.5
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 7.6e-32 142.1 243 37.0
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 2.9e-31 140.2 348 29.3
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.3e-28 131.3 96 59.4
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.9e-17 92.4 60 71.7
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 9.3e-14 82.0 73 60.3


User provided reference genes

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