Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1025 Punica granatum HOM05D004430 ORTHO05D005088 0.0e+00 2926.7 1519 100.0
Atru.chr9.2519 Acer truncatum HOM05D004430 ORTHO05D005088 9.3e-287 991.1 1701 44.1
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 3.7e-275 952.6 1621 44.3
Thecc.03G018800 Theobroma cacao HOM05D004430 ORTHO05D005088 4.2e-263 912.5 1611 43.6
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 9.4e-263 911.4 1640 42.4
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 6.8e-253 878.6 1710 40.6
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 5.7e-252 875.5 1643 42.2
QL10p008934 Quercus lobata HOM05D004430 ORTHO05D005088 4.1e-250 869.4 1638 41.1
TWI39G0976 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 5.4e-250 869.0 1619 41.8
RcHm_v2.0_Chr7g0193171 Rosa chinensis HOM05D004430 ORTHO05D005088 1.6e-249 867.5 1624 41.7
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 1.1e-247 861.3 1604 41.5
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 1.2e-246 857.8 1636 41.9
Prupe.5G170400 Prunus persica HOM05D004430 ORTHO05D005088 1.2e-246 857.8 1720 39.9
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 4.7e-246 855.9 1636 42.1
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 8.0e-246 855.1 1611 41.3
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 1.4e-245 854.4 1638 42.1
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 1.4e-245 854.4 1631 41.3
MD06G1170800 Malus domestica HOM05D004430 ORTHO05D005088 6.6e-240 835.5 1635 39.9
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 2.8e-238 830.1 1659 41.7
Duzib084G1065 Durio zibethinus HOM05D004430 ORTHO05D005088 1.2e-236 824.7 1656 41.7
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 1.3e-235 821.2 1691 39.7
TWI14G0761 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 2.4e-234 817.0 1625 40.1
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 3.2e-234 816.6 1616 41.1
FvH4_5g05640 Fragaria vesca HOM05D004430 ORTHO05D005088 1.7e-232 810.8 1627 40.4
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 1.5e-231 807.7 1618 40.7
MD14G1176500 Malus domestica HOM05D004430 ORTHO05D005088 7.3e-231 805.4 1653 40.0
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 1.2e-230 804.7 1600 39.8
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 1.8e-229 800.8 1632 40.1
FAN13G0016 Fragaria x ananassa HOM05D004430 ORTHO05D005088 3.4e-228 796.6 1632 39.8
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 7.8e-225 785.4 1691 38.6
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 5.0e-224 782.7 1635 39.4
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 5.0e-224 782.7 1627 39.7
FAN04G2171 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.5e-223 781.2 1626 39.2
Glyma.17G087600 Glycine max HOM05D004430 ORTHO05D005088 2.1e-222 777.3 1631 40.4
FAN18G2048 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.4e-221 774.6 1619 39.6
arahy.Tifrunner.gnm1.ann1.FBBL0Z Arachis hypogaea HOM05D004430 ORTHO05D005088 6.8e-221 772.3 1646 39.7
Lalb_Chr07g0182821 Lupinus albus HOM05D004430 ORTHO05D005088 1.5e-220 771.2 1658 40.2
FAN18G1146 Fragaria x ananassa HOM05D004430 ORTHO05D005088 7.5e-220 768.8 1625 39.4
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 6.4e-219 765.8 1669 38.3
Lalb_Chr12g0201701 Lupinus albus HOM05D004430 ORTHO05D005088 7.8e-209 732.3 1636 38.8
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 1.1e-205 721.8 1656 38.9
vmacro19413 Vaccinium macrocarpon HOM05D004430 ORTHO05D005088 1.4e-205 721.5 1639 37.8
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.1e-202 711.8 1672 37.7
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 4.2e-202 709.9 1680 37.3
CANSAT80G0620 Cannabis sativa HOM05D004430 ORTHO05D005088 2.1e-198 697.6 1643 37.5
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 6.2e-198 696.0 1610 38.0
Glyma.05G039400 Glycine max HOM05D004430 ORTHO05D005088 5.3e-197 693.0 1627 38.1
Ca_16154_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 2.9e-195 687.2 1623 37.5
Ciclev10018497m.g Citrus clementina HOM05D004430 ORTHO05D005088 1.1e-194 685.3 1430 39.0
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 7.9e-193 679.1 1598 37.5
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 1.0e-192 678.7 1596 37.0
TPR.G28716 Trifolium pratense HOM05D004430 ORTHO05D005088 3.0e-192 677.2 1626 37.7
Ca_16155_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 7.6e-188 662.5 1595 37.3
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 2.5e-186 657.5 1605 36.8
Rhsim08G0174600 Rhododendron simsii HOM05D004430 ORTHO05D005088 3.0e-184 650.6 1626 37.3
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 1.4e-181 641.7 1649 37.2
CiPaw.11G023400 Carya illinoinensis HOM05D004430 ORTHO05D005088 1.8e-181 641.3 1553 35.4
Migut.D01964 Erythranthe guttata HOM05D004430 ORTHO05D005088 2.4e-181 641.0 1635 35.7
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 3.1e-181 640.6 1683 36.1
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 4.5e-180 636.7 1592 36.9
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 7.6e-180 636.0 1646 36.9
Nn3g16781 Nelumbo nucifera HOM05D004430 ORTHO05D005088 5.5e-178 629.8 1682 35.5
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 7.9e-177 625.9 1667 36.5
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 1.0e-176 625.5 1661 36.2
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 2.3e-176 624.4 1633 36.5
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 6.7e-176 622.9 1584 36.1
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 1.9e-175 621.3 1643 36.3
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 3.7e-166 590.5 1589 35.4
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 4.8e-166 590.1 1688 34.1
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 1.1e-165 589.0 1667 34.7
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 1.2e-164 585.5 1622 35.3
MSTRG.4361 Avicennia marina HOM05D004430 ORTHO05D005088 1.3e-163 582.0 1637 34.8
Cc04_g12380 Coffea canephora HOM05D004430 ORTHO05D005088 2.0e-159 568.2 1315 38.2
CiPaw.12G028500 Carya illinoinensis HOM05D004430 ORTHO05D005088 9.7e-159 565.8 1413 36.3
SalBow6G6763 Salvia bowleyana HOM05D004430 ORTHO05D005088 3.7e-158 563.9 1631 34.8
SalBow6G6905 Salvia bowleyana HOM05D004430 ORTHO05D005088 1.1e-157 562.4 1631 34.9
Sc04g0001690 Simmondsia chinensis HOM05D004430 ORTHO05D005088 2.4e-157 561.2 1599 35.0
THA.LOC104809778 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 5.3e-157 560.1 1588 35.2
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 3.6e-153 547.4 1593 35.0
MBI19_g24062_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 3.1e-149 534.3 1743 32.7
Medtr3g077450 Medicago truncatula HOM05D004430 ORTHO05D005088 1.0e-147 529.3 1596 34.5
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 1.7e-147 528.5 1625 34.4
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 1.7e-147 528.5 1662 33.8
ECA232G4503 Erigeron canadensis HOM05D004430 ORTHO05D005088 6.5e-147 526.6 1569 34.3
TPR.G28721 Trifolium pratense HOM05D004430 ORTHO05D005088 1.3e-142 512.3 1619 35.0
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 8.3e-142 509.6 1621 33.7
Actinidia19338 Actinidia chinensis HOM05D004430 ORTHO05D005088 3.1e-141 507.7 1180 37.8
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 1.2e-137 495.7 1582 33.2
Aqoxy3G01105 Aquilegia oxysepala HOM05D004430 ORTHO05D005088 4.7e-137 493.8 1671 32.9
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 3.0e-136 491.1 1588 33.1
PSO017G2086 Papaver somniferum HOM05D004430 ORTHO05D005088 1.3e-131 475.7 1720 31.5
arahy.Tifrunner.gnm1.ann1.I95HTR Arachis hypogaea HOM05D004430 ORTHO05D005088 7.2e-130 469.9 747 43.0
PSO478G3312 Papaver somniferum HOM05D004430 ORTHO05D005088 3.0e-128 464.5 1725 31.7
CARHR232060 Cardamine hirsuta HOM05D004430 ORTHO05D005088 4.4e-127 460.7 1581 32.6
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 5.7e-127 460.3 1592 31.7
AT4G24680 Arabidopsis thaliana HOM05D004430 ORTHO05D005088 9.8e-127 459.5 1580 31.4
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 1.1e-125 456.1 1577 32.5
Lsat_1_v5_gn_4_75700 Lactuca sativa HOM05D004430 ORTHO05D005088 2.3e-123 448.4 1207 35.4
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 1.9e-122 445.3 1573 32.2
PGSC0003DMG402018164 Solanum tuberosum HOM05D004430 ORTHO05D005088 1.8e-120 438.7 1400 33.7
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 9.8e-119 433.0 1590 31.7
SGA_v2.0_scaffold7G04148 Striga asiatica HOM05D004430 ORTHO05D005088 5.4e-117 427.2 1627 31.6
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 6.2e-113 413.7 1643 31.1
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 6.8e-112 410.2 1616 31.1
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 4.4e-111 407.5 1592 31.5
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 2.9e-110 404.8 1586 31.5
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 2.1e-108 398.7 1582 30.3
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 2.1e-108 398.7 1582 31.3
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 3.5e-108 397.9 1588 31.2
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 6.6e-107 393.7 1572 30.5
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 3.6e-105 387.9 1570 30.0
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 1.1e-104 386.3 1579 30.0
HanXRQChr17g0548691 Helianthus annuus HOM05D004430 ORTHO05D005088 1.4e-104 386.0 1556 30.2
HanXRQChr11g0348291 Helianthus annuus HOM05D004430 ORTHO05D005088 2.9e-102 378.3 619 45.2
TAR622G0490 Trochodendron aralioides HOM05D004430 ORTHO05D005088 2.1e-100 372.1 988 34.8
ATR0757G157 Amborella trichopoda HOM05D004430 ORTHO05D005088 3.5e-100 371.3 1662 30.7
Hma1.2p1_0046F.1_g026730 Hydrangea macrophylla HOM05D004430 ORTHO05D005088 1.7e-99 369.0 1238 34.1
BcaC06g32869 Brassica carinata HOM05D004430 ORTHO05D005088 2.3e-99 368.6 1575 30.2
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 6.6e-91 340.5 1543 29.8
unitig_37.g12744 Utricularia gibba HOM05D004430 ORTHO05D005088 1.5e-87 329.3 1610 30.6
MBI10_g44386_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 1.3e-83 316.2 1473 29.6
BcaB03g12441 Brassica carinata HOM05D004430 ORTHO05D005088 1.3e-81 309.7 1290 30.0
Actinidia19112 Actinidia chinensis HOM05D004430 ORTHO05D005088 2.8e-81 308.5 336 58.6
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 3.5e-68 265.0 1577 26.9
Actinidia33085 Actinidia chinensis HOM05D004430 ORTHO05D005088 3.2e-61 241.9 682 33.6
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 2.6e-55 222.2 1636 27.1
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 4.2e-53 214.9 1487 27.1
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 1.3e-49 203.4 193 65.3
MBI10_g44384_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 2.5e-45 189.1 204 59.3
CDE06G0437 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 2.7e-44 185.7 1438 26.3
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 1.4e-43 183.3 485 34.4
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 1.5e-39 169.9 763 30.7
HPP92_024337 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.5e-37 163.3 1563 25.3
CDE02G0036 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 7.2e-37 161.0 207 52.7
Actinidia19111 Actinidia chinensis HOM05D004430 ORTHO05D005088 2.7e-36 159.1 442 33.7
HPP92_006251 Vanilla planifolia HOM05D004430 ORTHO05D005088 2.6e-34 152.5 1259 26.9
SEGI_40513 Sequoiadendron giganteum HOM05D004430 ORTHO05D005088 7.4e-34 151.0 578 33.2
HPP92_006241 Vanilla planifolia HOM05D004430 ORTHO05D005088 3.7e-33 148.7 216 53.2
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.7e-25 123.2 1571 24.2
Actinidia33086 Actinidia chinensis HOM05D004430 ORTHO05D005088 5.9e-23 114.8 381 30.7
Psat2g086200 Pisum sativum HOM05D004430 ORTHO05D005088 6.8e-19 101.3 186 41.4
TAR622G0951 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.8e-16 93.2 142 46.5
Psat2g086240 Pisum sativum HOM05D004430 ORTHO05D005088 7.0e-16 91.3 187 39.6
Pp3c4_23740 Physcomitrium patens HOM05D004430 ORTHO05D005088 2.0e-15 89.7 1414 25.4
Psat2g098600 Pisum sativum HOM05D003093 ORTHO05D005088 5.9e-15 88.2 157 42.7
TAR622G0342 Trochodendron aralioides HOM05D004430 ORTHO05D005088 2.9e-14 85.9 86 59.3
HPP92_024330 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.5e-13 83.6 1569 23.2
Actinidia19337 Actinidia chinensis HOM05D004430 ORTHO05D005088 9.5e-13 80.9 165 37.0
THA.LOC104822199 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 2.1e-12 79.7 332 27.4
SHI23780 Sapria himalayana HOM05D004430 ORTHO05D005088 3.7e-09 68.9 108 49.1
TAR629G1829 Trochodendron aralioides HOM05D003072 ORTHO05D008464 3.5e-07 62.4 136 38.2
Pp3c4_22960 Physcomitrium patens HOM05D004430 ORTHO05D005088 1.0e-06 60.8 1342 23.2
Pp3c26_2670 Physcomitrium patens HOM05D004430 ORTHO05D005088 3.9e-06 58.9 234 32.9


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