Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 6.3e-229 797.7 626 100.0
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 1.2e-73 282.0 591 41.6
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 8.3e-64 249.2 600 39.3
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 3.8e-61 240.4 600 37.2
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 8.6e-53 212.6 598 31.3
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 1.2e-51 208.8 586 37.4
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 2.6e-49 201.1 619 32.0
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 1.9e-47 194.9 597 31.2
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 1.2e-46 192.2 599 36.6
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 1.6e-46 191.8 586 45.4
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 5.0e-45 186.8 609 33.2
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 1.9e-44 184.9 599 35.9
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 5.6e-44 183.3 619 31.2
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 4.7e-43 180.3 630 27.9
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 1.8e-42 178.3 606 29.2
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 5.8e-41 173.3 647 32.0
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.7e-40 171.8 587 34.8
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 3.2e-39 167.5 588 30.3
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 4.6e-38 163.7 586 34.0
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 7.8e-38 162.9 626 27.6
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 2.3e-37 161.4 595 32.9
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 1.9e-36 158.3 599 31.2
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 9.5e-36 156.0 593 36.8
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 9.5e-36 156.0 624 32.9
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.2e-35 155.6 593 32.5
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 2.4e-34 151.4 606 26.9
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 5.2e-34 150.2 589 33.6
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 2.6e-33 147.9 593 27.7
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 7.6e-33 146.4 594 25.6
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 2.2e-32 144.8 590 28.8
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 2.2e-32 144.8 590 41.9
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 5.1e-29 133.7 618 24.8
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 6.6e-29 133.3 593 35.1
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 6.6e-29 133.3 395 37.2
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 1.1e-28 132.5 623 31.5
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 1.5e-28 132.1 586 34.3
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 1.9e-28 131.7 620 31.8
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.3e-28 131.0 588 38.1
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.3e-28 130.6 587 37.1
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 4.3e-28 130.6 603 34.5
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 9.6e-28 129.4 714 26.6
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 1.6e-27 128.6 590 40.8
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 1.6e-27 128.6 582 39.2
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 3.6e-27 127.5 612 28.3
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 8.1e-27 126.3 259 36.3
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.8e-26 125.2 593 30.2
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 2.4e-26 124.8 587 30.2
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 6.9e-26 123.2 592 25.5
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 6.9e-26 123.2 597 31.8
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 1.5e-25 122.1 587 32.5
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 1.5e-25 122.1 664 30.1
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 3.4e-25 120.9 588 30.6
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 4.4e-25 120.6 588 27.2
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 7.6e-25 119.8 588 37.1
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 7.6e-25 119.8 581 30.1
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 1.3e-24 119.0 717 30.3
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 1.3e-24 119.0 585 24.3
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 2.2e-24 118.2 604 29.1
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 3.2e-23 114.4 593 25.8
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 4.2e-23 114.0 602 38.0
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 5.4e-23 113.6 591 31.5
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 5.4e-23 113.6 590 35.1
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 9.3e-23 112.8 661 24.4
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 9.3e-23 112.8 585 34.7
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.2e-22 112.5 588 29.9
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.6e-22 112.1 614 25.7
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.7e-22 111.3 661 24.2
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.3e-21 109.0 587 35.4
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 5.1e-21 107.1 592 24.0
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 5.1e-21 107.1 592 24.0
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 1.6e-19 102.1 587 34.9
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 3.6e-19 100.9 591 27.4
unitig_8.g3020 Utricularia gibba HOM05D004923 ORTHO05D005940 4.8e-19 100.5 593 22.6
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.0e-18 97.4 587 34.6
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 5.3e-18 97.1 116 46.6
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 5.3e-18 97.1 112 50.9
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.5e-17 95.5 112 50.0
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 2.6e-17 94.7 608 24.7
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.4e-17 94.4 587 34.2
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 3.4e-17 94.4 325 36.6
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.2e-16 91.7 587 28.6
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 6.4e-16 90.1 587 30.2
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 1.1e-15 89.4 616 37.2
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 1.1e-15 89.4 577 23.2
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 3.2e-15 87.8 593 29.0
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 7.9e-14 83.2 588 36.1
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 2.3e-13 81.6 335 27.8
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 3.9e-13 80.9 614 31.1
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 3.9e-13 80.9 618 35.3
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 5.1e-13 80.5 111 42.3
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 5.1e-13 80.5 549 33.5
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 5.1e-13 80.5 614 27.5
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 6.7e-13 80.1 110 46.4
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 8.7e-13 79.7 115 45.2
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 1.5e-12 79.0 300 30.3
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.9e-12 78.6 593 23.4
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 3.3e-12 77.8 616 22.4
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 7.4e-12 76.6 584 22.4
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 7.4e-12 76.6 713 24.0
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 9.6e-12 76.3 108 43.5
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 3.7e-11 74.3 108 42.6
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 4.8e-11 73.9 444 24.3
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 6.2e-11 73.6 112 42.0
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 6.2e-11 73.6 106 48.1
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 1.1e-10 72.8 663 22.8
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 2.4e-10 71.6 675 29.6
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 2.4e-10 71.6 585 31.1
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 1.2e-09 69.3 113 36.3
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 1.5e-09 68.9 587 30.8
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 1.5e-09 68.9 142 33.8
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 4.5e-09 67.4 648 21.5
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 4.5e-09 67.4 111 36.0
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 1.3e-08 65.9 214 32.2
Ah.04g159890 Amaranthus hybridus HOM05D004923 ORTHO05D005940 8.4e-08 63.2 102 43.1
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 8.4e-08 63.2 609 28.6
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 1.1e-07 62.8 628 35.2
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.4e-07 62.4 587 25.6
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 5.5e-07 60.5 225 28.0
SHI18226 Sapria himalayana HOM05D004923 ORTHO05D005940 5.5e-07 60.5 73 42.5
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 7.9e-06 56.6 589 34.8


User provided reference genes

Program Settings