Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0877 Punica granatum HOM05D006198 ORTHO05D008226 5.4e-131 471.1 253 100.0
Eucgr.E02394 Eucalyptus grandis HOM05D006198 ORTHO05D008226 1.2e-85 320.5 249 71.1
MELO3C007142.2 Cucumis melo HOM05D006198 ORTHO05D008226 3.8e-84 315.5 252 69.4
Thecc.06G152500 Theobroma cacao HOM05D006198 ORTHO05D008226 6.5e-84 314.7 250 70.4
CsaV3_6G051650 Cucumis sativus L. HOM05D006198 ORTHO05D008226 3.2e-83 312.4 247 68.8
TAR629G0041 Trochodendron aralioides HOM05D006198 ORTHO05D008226 2.1e-82 309.7 249 67.9
QL05p058855 Quercus lobata HOM05D006198 ORTHO05D008226 2.7e-82 309.3 253 68.8
TAR629G2249 Trochodendron aralioides HOM05D006198 ORTHO05D008226 3.6e-82 308.9 251 67.3
RcHm_v2.0_Chr5g0013711 Rosa chinensis HOM05D006198 ORTHO05D008226 6.1e-82 308.1 250 68.4
Atru.chr10.1293 Acer truncatum HOM05D006198 ORTHO05D008226 1.8e-81 306.6 251 67.7
COL.COLO4_38286 Corchorus olitorius HOM05D006198 ORTHO05D008226 1.8e-81 306.6 253 68.8
CiPaw.09G125600 Carya illinoinensis HOM05D006198 ORTHO05D008226 3.0e-81 305.8 256 68.4
MD10G1263800 Malus domestica HOM05D006198 ORTHO05D008226 5.1e-81 305.1 256 66.8
Cpa.g.sc166.25 Carica papaya HOM05D006198 ORTHO05D008226 6.7e-81 304.7 246 68.7
Nn3g20699 Nelumbo nucifera HOM05D006198 ORTHO05D008226 6.7e-81 304.7 251 69.7
Atru.chr10.1313 Acer truncatum HOM05D006198 ORTHO05D008226 1.5e-80 303.5 251 67.7
Duzib160G0456 Durio zibethinus HOM05D006198 ORTHO05D008226 2.6e-80 302.8 249 67.5
FvH4_3g05790 Fragaria vesca HOM05D006198 ORTHO05D008226 4.4e-80 302.0 252 67.9
FAN16G3463 Fragaria x ananassa HOM05D006198 ORTHO05D008226 4.4e-80 302.0 250 68.4
ClCG01G024530 Citrullus lanatus HOM05D006198 ORTHO05D008226 1.7e-79 300.1 246 67.9
Prupe.4G078700 Prunus persica HOM05D006198 ORTHO05D008226 2.2e-79 299.7 247 68.4
Dinv30723 Davidia involucrata HOM05D006198 ORTHO05D008226 2.8e-79 299.3 252 68.7
Atru.chr10.1297 Acer truncatum HOM05D006198 ORTHO05D008226 1.1e-78 297.4 251 66.9
Nn6g32274 Nelumbo nucifera HOM05D006198 ORTHO05D008226 1.1e-78 297.4 251 68.1
FAN11G0340 Fragaria x ananassa HOM05D006198 ORTHO05D008226 3.1e-78 295.8 252 67.1
Sed0015649 Sechium edule HOM05D006198 ORTHO05D008226 3.1e-78 295.8 249 65.1
TWI53G0219 Tripterygium wilfordii HOM05D006198 ORTHO05D008226 5.3e-78 295.0 253 65.6
TWI09G1426 Tripterygium wilfordii HOM05D006198 ORTHO05D008226 9.1e-78 294.3 251 64.9
Gohir.D09G077900 Gossypium hirsutum HOM05D006198 ORTHO05D008226 1.2e-77 293.9 253 66.8
Gohir.A09G077700 Gossypium hirsutum HOM05D006198 ORTHO05D008226 5.9e-77 291.6 253 66.4
Ciclev10016356m.g Citrus clementina HOM05D006198 ORTHO05D008226 1.0e-76 290.8 244 67.2
Manes.15G120300 Manihot esculenta HOM05D006198 ORTHO05D008226 1.7e-76 290.0 254 63.8
Potri.011G080300 Populus trichocarpa HOM05D006198 ORTHO05D008226 1.7e-76 290.0 253 62.8
Gorai.006G093100 Gossypium raimondii HOM05D006198 ORTHO05D008226 2.2e-76 289.7 250 66.0
MBI10_g21114_MAGBIO Magnolia biondii HOM05D006198 ORTHO05D008226 1.9e-75 286.6 247 65.2
Lalb_Chr12g0208941 Lupinus albus HOM05D006198 ORTHO05D008226 2.5e-75 286.2 245 66.9
Aqoxy4G00108 Aquilegia oxysepala HOM05D006198 ORTHO05D008226 1.0e-73 280.8 247 65.2
Phvul.009G219000 Phaseolus vulgaris HOM05D006198 ORTHO05D008226 1.4e-73 280.4 250 63.6
Actinidia39563 Actinidia chinensis HOM05D006198 ORTHO05D008226 1.8e-73 280.0 253 66.0
Glyma.09G082200 Glycine max HOM05D006198 ORTHO05D008226 1.8e-73 280.0 247 64.4
arahy.Tifrunner.gnm1.ann1.ET305C Arachis hypogaea HOM05D006198 ORTHO05D008226 2.3e-73 279.6 245 64.5
arahy.Tifrunner.gnm1.ann1.8B838V Arachis hypogaea HOM05D006198 ORTHO05D008226 1.1e-72 277.3 245 64.1
HanXRQChr01g0020411 Helianthus annuus HOM05D006198 ORTHO05D008226 1.1e-72 277.3 256 64.8
Glyma.15G190700 Glycine max HOM05D006198 ORTHO05D008226 2.6e-72 276.2 247 63.6
Lsat_1_v5_gn_1_96760 Lactuca sativa HOM05D006198 ORTHO05D008226 1.3e-71 273.9 250 64.8
CANSAT35G1481 Cannabis sativa HOM05D006198 ORTHO05D008226 2.2e-71 273.1 258 62.4
PSO170G0869 Papaver somniferum HOM05D006198 ORTHO05D008226 2.2e-71 273.1 250 64.8
ECA248G2800 Erigeron canadensis HOM05D006198 ORTHO05D008226 3.7e-71 272.3 252 62.7
Lj4g0025062 Lotus japonicus HOM05D006198 ORTHO05D003063 4.8e-71 271.9 245 63.7
vmacro15943 Vaccinium macrocarpon HOM05D006198 ORTHO05D008226 8.2e-71 271.2 252 63.9
GSVIVG01021428001 Vitis vinifera HOM05D006198 ORTHO05D008226 5.3e-70 268.5 227 65.6
ATR0585G073 Amborella trichopoda HOM05D006198 ORTHO05D008226 1.6e-69 266.9 249 63.1
Lj2A307G26 Lonicera japonica HOM05D006198 ORTHO05D008226 1.6e-69 266.9 257 65.0
Psat7g090320 Pisum sativum HOM05D006198 ORTHO05D008226 3.5e-69 265.8 247 62.3
MSTRG.16229 Avicennia marina HOM05D006198 ORTHO05D008226 4.5e-69 265.4 253 62.5
Hma1.2p1_0259F.1_g104290 Hydrangea macrophylla HOM05D006198 ORTHO05D008226 5.9e-69 265.0 245 63.7
Ca_18268_v3 Cicer arietinum L. HOM05D006198 ORTHO05D008226 7.7e-69 264.6 243 63.0
Nitab4.5_0001655g0050 Nicotiana tabacum HOM05D006198 ORTHO05D008226 1.3e-68 263.8 251 61.8
Sopen02g019760 Solanum pennellii HOM05D006198 ORTHO05D008226 2.2e-68 263.1 253 60.9
HPP92_023266 Vanilla planifolia HOM05D006198 ORTHO05D008226 2.2e-68 263.1 242 62.0
VMungo1309G2860 Vigna mungo HOM05D006198 ORTHO05D008226 2.2e-68 263.1 276 58.0
AUR62030229 Chenopodium quinoa HOM05D006198 ORTHO05D008226 3.8e-68 262.3 293 54.3
Sc24g0001850 Simmondsia chinensis HOM05D006198 ORTHO05D008226 3.8e-68 262.3 250 62.0
Nitab4.5_0005219g0070 Nicotiana tabacum HOM05D006198 ORTHO05D008226 6.5e-68 261.5 254 61.0
Medtr4g096750 Medicago truncatula HOM05D006198 ORTHO05D008226 8.5e-68 261.2 248 60.5
HPP92_023299 Vanilla planifolia HOM05D006198 ORTHO05D008226 1.5e-67 260.4 242 61.2
CAN.G650.24 Capsicum annuum HOM05D006198 ORTHO05D008226 2.5e-67 259.6 251 60.2
Actinidia07684 Actinidia chinensis HOM05D006198 ORTHO05D008226 2.1e-66 256.5 257 63.0
Cfa000959 Carpinus fangiana HOM05D006198 ORTHO05D008226 3.6e-66 255.8 231 66.7
CDE02G2137 Ceratophyllum demersum HOM05D006198 ORTHO05D008226 3.6e-66 255.8 249 60.2
EL10Ac8g19743 Beta vulgaris HOM05D006198 ORTHO05D008226 1.4e-65 253.8 252 57.5
Haze_05575 Corylus avellana HOM05D006198 ORTHO05D008226 1.4e-65 253.8 309 55.0
SalBow8G2100 Salvia bowleyana HOM05D006198 ORTHO05D008226 4.0e-65 252.3 261 59.8
Migut.M00923 Erythranthe guttata HOM05D006198 ORTHO05D008226 5.2e-65 251.9 252 59.1
PGSC0003DMG401008288 Solanum tuberosum HOM05D006198 ORTHO05D008226 8.8e-65 251.1 258 59.3
Peaxi162Scf00796g00114 Petunia axillaris HOM05D006198 ORTHO05D008226 4.4e-64 248.8 240 57.9
Os01g0666500 Oryza sativa ssp. japonica HOM05D006198 ORTHO05D008226 9.7e-64 247.7 255 56.9
AUR62027530 Chenopodium quinoa HOM05D006198 ORTHO05D008226 2.8e-63 246.1 279 55.2
SGA_v2.0_scaffold333G48994 Striga asiatica HOM05D006198 ORTHO05D008226 1.1e-62 244.2 262 58.4
Zm00001eb157440 Zea mays HOM05D006198 ORTHO05D008226 1.4e-62 243.8 247 60.7
Sabra11G0070000 Salix brachista HOM05D006198 ORTHO05D008226 7.0e-62 241.5 203 63.1
Sabra11G0067700 Salix brachista HOM05D006198 ORTHO05D008226 1.6e-61 240.4 203 63.1
Zm00001eb359760 Zea mays HOM05D006198 ORTHO05D008226 2.0e-61 240.0 250 59.2
unitig_578.g16668 Utricularia gibba HOM05D006198 ORTHO05D008226 1.1e-59 234.2 259 55.6
Cc09_g09250 Coffea canephora HOM05D006198 ORTHO05D008226 2.5e-59 233.0 229 60.3
Aa31LG6G950 Aethionema arabicum HOM05D006198 ORTHO05D008226 1.2e-58 230.7 246 56.9
DCAR_025303 Daucus carota HOM05D006198 ORTHO05D008226 6.1e-58 228.4 254 55.9
THA.LOC104827723 Tarenaya hassleriana HOM05D006198 ORTHO05D008226 1.2e-56 224.2 250 55.2
Thhalv10024846m.g Eutrema salsugineum HOM05D006198 ORTHO05D003063 1.7e-55 220.3 240 54.6
SEGI_09220 Sequoiadendron giganteum HOM05D006198 ORTHO05D008226 3.7e-55 219.2 247 52.6
C07p49570 Brassica napus HOM05D006198 ORTHO05D003063 6.3e-55 218.4 247 53.4
BolC7t45461H Brassica oleracea HOM05D006198 ORTHO05D003063 1.1e-54 217.6 247 53.0
SGA_v2.0_scaffold1G00157 Striga asiatica HOM05D006198 ORTHO05D008226 1.6e-53 213.8 254 53.5
A03p51170 Brassica napus HOM05D006198 ORTHO05D003063 2.7e-53 213.0 247 53.0
BraA03t14199Z Brassica rapa HOM05D006198 ORTHO05D003063 2.7e-53 213.0 247 52.6
PSO017G1039 Papaver somniferum HOM05D006198 ORTHO05D008226 1.0e-52 211.1 214 59.3
Sp7g15810 Schrenkiella parvula HOM05D006198 ORTHO05D008226 1.0e-52 211.1 254 51.6
AL7G36130 Arabidopsis lyrata HOM05D006198 ORTHO05D003063 1.7e-52 210.3 253 51.4
Carub.0007s2303 Capsella rubella HOM05D006198 ORTHO05D008226 1.5e-51 207.2 246 53.3
Oeu030914.3 Olea europaea HOM05D006198 ORTHO05D008226 4.2e-51 205.7 296 48.0
AagrBONN_evm.TU.Sc2ySwM_228.4358 Anthoceros agrestis HOM05D006198 ORTHO05D008226 3.6e-50 202.6 233 54.9
Solyc02g070680.4 Solanum lycopersicum HOM05D006198 ORTHO05D008226 3.6e-50 202.6 204 57.4
Pp3c24_15440 Physcomitrium patens HOM05D006198 ORTHO05D008226 1.8e-46 190.3 261 47.1
Mapoly0061s0133 Marchantia polymorpha HOM05D006198 ORTHO05D008226 1.6e-45 187.2 239 51.0
Rhsim02G0156800 Rhododendron simsii HOM05D006198 ORTHO05D008226 2.0e-45 186.8 245 50.2
BcaNung05123 Brassica carinata HOM05D006198 ORTHO05D008226 1.0e-44 184.5 224 50.9
BcaNung05671 Brassica carinata HOM05D006198 ORTHO05D008226 1.9e-43 180.3 223 49.8
SMO361G0608 Selaginella moellendorffii HOM05D006198 ORTHO05D008226 1.6e-42 177.2 246 49.6
Hund21523 Selenicereus undatus HOM05D006198 ORTHO05D008226 3.5e-37 159.5 157 58.6
CARHR225050 Cardamine hirsuta HOM05D006198 ORTHO05D008226 3.3e-35 152.9 155 60.0
CDE08G0452 Ceratophyllum demersum HOM05D001706 ORTHO05D008226 9.8e-32 141.4 149 59.1
Atru.chr10.1305 Acer truncatum HOM05D006198 ORTHO05D008226 7.8e-29 131.7 120 64.2
Zm00001eb243030 Zea mays HOM05D006198 ORTHO05D008226 7.5e-24 115.2 123 56.1
Zm00001eb373810 Zea mays HOM05D006198 ORTHO05D008226 7.5e-24 115.2 123 56.1
CBR_g31781 Chara braunii HOM05D000019 ORTHO05D000048 6.0e-21 105.5 248 37.9
Zm00001eb235600 Zea mays HOM05D006198 ORTHO05D008226 1.0e-20 104.8 115 53.9
Atru.chr10.1302 Acer truncatum HOM05D000067 ORTHO05D000280 1.9e-19 100.5 91 62.6
Gohir.D05G152000 Gossypium hirsutum HOM05D006198 ORTHO05D008226 1.4e-17 94.4 73 71.2
HanXRQChr14g0435081 Helianthus annuus HOM05D006198 ORTHO05D008226 1.8e-17 94.0 109 56.9
SEGI_25377 Sequoiadendron giganteum HOM05D006198 ORTHO05D008226 3.4e-16 89.7 91 50.5
Gorai.009G156000 Gossypium raimondii HOM05D006198 ORTHO05D008226 4.4e-16 89.4 77 66.2
CBR_g39020 Chara braunii HOM05D006198 ORTHO05D001303 3.8e-15 86.3 212 35.4
MD05G1286000 Malus domestica HOM05D006198 ORTHO05D008226 5.8e-08 62.4 55 65.5
Cre12.g523800 Chlamydomonas reinhardtii HOM05D006198 ORTHO05D008226 1.7e-07 60.8 61 59.0
Cre12.g523832 Chlamydomonas reinhardtii HOM05D006198 ORTHO05D008226 3.8e-07 59.7 190 32.6
Sabra11G0070100 Salix brachista HOM05D006198 ORTHO05D008226 6.4e-07 58.9 55 60.0
Sabra11G0067800 Salix brachista HOM05D006198 ORTHO05D008226 3.2e-06 56.6 51 62.7


User provided reference genes

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