Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0870 Punica granatum HOM05D005826 ORTHO05D004357 1.5e-76 289.7 174 100.0
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 4.2e-42 175.3 130 80.0
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 6.1e-33 144.8 131 69.5
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 8.8e-32 141.0 131 60.3
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 2.6e-31 139.4 134 59.0
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 3.4e-31 139.0 133 66.2
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 9.8e-31 137.5 141 63.8
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 8.3e-30 134.4 144 66.0
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 1.4e-29 133.7 129 64.3
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 1.2e-28 130.6 133 57.9
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 1.6e-28 130.2 122 57.4
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 3.5e-28 129.0 130 60.0
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 4.5e-28 128.6 129 69.8
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 2.9e-27 125.9 133 57.9
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 6.5e-27 124.8 135 60.7
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 1.5e-26 123.6 134 69.4
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 1.5e-26 123.6 130 57.7
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 2.5e-26 122.9 127 57.5
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 3.3e-26 122.5 134 55.2
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 4.2e-26 122.1 130 64.6
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 9.5e-26 120.9 134 67.2
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 2.1e-25 119.8 127 61.4
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 8.0e-25 117.9 132 53.8
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 8.0e-25 117.9 132 53.8
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 1.0e-24 117.5 121 53.7
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 1.0e-24 117.5 121 53.7
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 3.0e-24 115.9 129 61.2
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 2.6e-23 112.8 134 66.4
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 4.4e-23 112.1 133 57.1
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 5.7e-23 111.7 138 57.2
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 7.5e-23 111.3 118 53.4
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.3e-22 110.5 120 62.5
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 1.3e-22 110.5 136 51.5
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 2.2e-22 109.8 130 53.1
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 2.8e-22 109.4 129 64.3
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 3.7e-22 109.0 130 52.3
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 6.3e-22 108.2 197 47.2
SMO196G0190 Selaginella moellendorffii HOM05D005826 ORTHO05D004357 6.3e-22 108.2 89 67.4
BraA06t26622Z Brassica rapa HOM05D005826 ORTHO05D004357 1.4e-21 107.1 117 51.3
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 3.1e-21 105.9 119 52.1
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 3.1e-21 105.9 119 52.1
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 3.1e-21 105.9 119 52.1
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 5.4e-21 105.1 127 57.5
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 5.4e-21 105.1 82 69.5
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 5.4e-21 105.1 134 50.7
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 7.0e-21 104.8 132 52.3
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 9.2e-21 104.4 135 54.1
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 2.7e-20 102.8 128 51.6
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 3.5e-20 102.4 130 63.8
CBR_g48434 Chara braunii HOM05D005826 ORTHO05D004357 4.5e-20 102.1 81 59.3
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 4.5e-20 102.1 64 78.1
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 4.5e-20 102.1 130 47.7
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 4.5e-20 102.1 130 47.7
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 5.9e-20 101.7 127 53.5
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 1.0e-19 100.9 134 53.0
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 1.3e-19 100.5 140 49.3
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 2.3e-19 99.8 136 63.2
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 2.3e-19 99.8 119 56.3
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 5.0e-19 98.6 130 50.8
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 6.6e-19 98.2 115 60.0
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 8.6e-19 97.8 132 48.5
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 8.6e-19 97.8 130 56.9
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.6e-19 97.8 130 56.9
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 1.1e-18 97.4 136 47.8
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 1.1e-18 97.4 67 71.6
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 1.5e-18 97.1 140 50.7
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 2.5e-18 96.3 60 78.3
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 7.3e-18 94.7 134 46.3
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 9.5e-18 94.4 136 47.1
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 1.2e-17 94.0 60 76.7
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 1.6e-17 93.6 133 47.4
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 2.1e-17 93.2 59 76.3
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 2.1e-17 93.2 126 54.8
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 3.6e-17 92.4 59 76.3
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 4.7e-17 92.0 57 80.7
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 4.7e-17 92.0 133 46.6
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 4.7e-17 92.0 128 60.9
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 8.0e-17 91.3 57 80.7
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 1.0e-16 90.9 133 52.6
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 1.0e-16 90.9 133 51.1
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 1.4e-16 90.5 118 45.8
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 1.4e-16 90.5 121 48.8
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 3.0e-16 89.4 59 76.3
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 4.0e-16 89.0 122 52.5
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 4.0e-16 89.0 122 52.5
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 6.8e-16 88.2 129 52.7
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 1.2e-15 87.4 131 46.6
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 1.2e-15 87.4 131 47.3
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 1.5e-15 87.0 47 89.4
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 1.5e-15 87.0 47 89.4
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 1.5e-15 87.0 47 89.4
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 2.0e-15 86.7 131 45.8
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 2.0e-15 86.7 62 69.4
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 2.6e-15 86.3 53 81.1
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.6e-15 86.3 115 57.4
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 9.8e-15 84.3 116 50.9
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 9.8e-15 84.3 116 50.9
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 9.8e-15 84.3 57 71.9
CARHR186850 Cardamine hirsuta HOM05D005826 ORTHO05D004357 1.3e-14 84.0 56 73.2
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis HOM05D005826 ORTHO05D004357 1.7e-14 83.6 51 80.4
A06p36960 Brassica napus HOM05D005826 ORTHO05D004357 1.7e-14 83.6 94 48.9
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 1.7e-14 83.6 153 44.4
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 2.2e-14 83.2 54 75.9
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 2.9e-14 82.8 56 73.2
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 2.9e-14 82.8 44 90.9
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 4.9e-14 82.0 55 72.7
BcaNung03909 Brassica carinata HOM05D005826 ORTHO05D004357 4.9e-14 82.0 101 45.5
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 8.3e-14 81.3 43 90.7
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 2.4e-13 79.7 116 44.0
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 5.4e-13 78.6 121 49.6
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 7.0e-13 78.2 46 80.4
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 1.2e-12 77.4 42 88.1
Rhsim11G0104700 Rhododendron simsii HOM05D005826 ORTHO05D004357 3.0e-11 72.8 105 53.3
Cre03.g201250 Chlamydomonas reinhardtii HOM05D005826 ORTHO05D004357 6.6e-11 71.6 83 45.8
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 4.3e-10 68.9 127 39.4
MBI12_g47801_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 4.3e-10 68.9 43 74.4
MBI09_g02136_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 4.7e-09 65.5 42 71.4
MBI12_g27791_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 4.7e-09 65.5 42 71.4
PGSC0003DMG400018243 Solanum tuberosum HOM05D005826 ORTHO05D004357 8.0e-09 64.7 96 45.8
Migut.O00760 Erythranthe guttata HOM05D005826 ORTHO05D004357 8.3e-06 54.7 79 50.6


User provided reference genes

Program Settings