Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 1.1e-209 733.0 371 100.0
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.9e-153 546.2 371 73.0
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 3.3e-153 545.4 373 74.3
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.1e-152 542.7 376 75.0
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 6.3e-152 541.2 376 73.4
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 4.1e-151 538.5 376 72.1
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 6.9e-151 537.7 373 72.7
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.5e-150 536.6 376 71.5
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 7.6e-150 534.3 376 73.1
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 3.2e-148 528.9 371 71.7
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 5.5e-148 528.1 376 72.3
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 2.1e-147 526.2 374 71.7
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.3e-146 523.5 371 71.7
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.8e-146 523.1 376 70.5
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 1.8e-146 523.1 371 71.7
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 2.3e-146 522.7 345 72.8
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 2.3e-146 522.7 370 71.4
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 6.7e-146 521.2 375 71.5
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 6.7e-146 521.2 375 71.5
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.5e-145 520.0 367 71.4
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.9e-145 519.6 370 70.0
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 2.5e-145 519.2 340 72.4
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 2.5e-145 519.2 345 73.0
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 3.3e-145 518.8 374 70.9
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 3.3e-145 518.8 373 70.5
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 5.7e-145 518.1 374 70.6
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.2e-144 516.2 374 70.3
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 2.2e-144 516.2 372 70.7
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 2.2e-144 516.2 377 71.6
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 2.2e-144 516.2 348 72.7
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 2.8e-144 515.8 375 70.1
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 3.7e-144 515.4 376 69.4
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 3.7e-144 515.4 373 71.3
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 3.7e-144 515.4 362 70.7
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 4.8e-144 515.0 371 70.9
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 6.3e-144 514.6 373 71.3
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 1.4e-143 513.5 377 69.2
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.8e-143 513.1 375 70.9
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 2.4e-143 512.7 372 69.4
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 5.3e-143 511.5 312 78.8
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 6.9e-143 511.1 372 69.6
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 2.0e-142 509.6 379 68.9
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.0e-142 509.6 376 69.4
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 2.2e-141 506.1 379 68.3
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.8e-141 505.4 377 67.9
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 1.1e-140 503.8 370 67.3
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.4e-140 503.4 372 67.7
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 2.5e-140 502.7 373 68.4
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 2.5e-140 502.7 375 68.5
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 2.5e-140 502.7 375 71.2
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 3.2e-140 502.3 379 69.7
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 9.4e-140 500.7 370 67.6
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 3.6e-139 498.8 370 67.3
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 6.1e-139 498.0 374 67.9
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 7.9e-139 497.7 374 67.9
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 7.9e-139 497.7 374 67.9
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 1.4e-138 496.9 377 66.8
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 2.3e-138 496.1 371 65.5
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 3.0e-138 495.7 422 64.0
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 3.0e-138 495.7 375 68.3
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.5e-137 493.4 316 76.6
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 2.5e-137 492.7 373 66.8
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 3.3e-137 492.3 316 76.3
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 4.3e-137 491.9 377 67.9
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 9.7e-137 490.7 372 69.4
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 2.8e-136 489.2 314 74.8
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.4e-135 486.9 378 66.1
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 2.4e-135 486.1 361 69.5
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.4e-135 486.1 386 64.5
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 6.9e-135 484.6 371 63.9
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 4.5e-134 481.9 380 65.5
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 5.9e-134 481.5 367 67.6
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.9e-132 476.5 403 61.3
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 4.2e-132 475.3 376 65.2
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 5.5e-132 474.9 329 71.1
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 2.7e-131 472.6 371 63.3
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 3.6e-131 472.2 356 68.0
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.8e-130 469.9 282 80.1
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 5.1e-130 468.4 339 68.7
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.0e-129 466.5 308 74.4
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 2.6e-129 466.1 372 64.0
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 2.2e-128 463.0 301 75.7
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.3e-128 461.5 280 80.7
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 5.3e-127 458.4 370 63.8
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.6e-126 456.1 281 79.7
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 3.8e-125 452.2 364 64.0
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 1.5e-124 450.3 369 58.8
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 3.0e-122 442.6 328 67.7
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 2.3e-114 416.4 473 50.5
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 6.1e-107 391.7 361 57.9
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 1.7e-104 383.6 249 75.1
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.0e-102 376.7 393 55.5
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 4.5e-102 375.6 336 56.0
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.0e-97 360.1 365 51.5
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.0e-97 360.1 365 51.5
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 7.5e-97 358.2 231 75.8
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 9.5e-92 341.3 212 79.7
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 1.8e-90 337.0 275 60.0
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 3.4e-89 332.8 285 60.7
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.0e-86 322.0 252 63.5
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.4e-57 226.5 223 54.3
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 7.1e-47 192.2 144 63.9
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 1.1e-42 178.3 220 45.0
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 4.0e-42 176.4 178 56.7
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 8.4e-40 168.7 125 70.4
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.9e-36 157.5 152 55.9
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 4.1e-34 149.8 129 59.7
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.8e-26 124.4 85 71.8
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 2.6e-25 120.6 115 46.1
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.3e-19 101.7 133 45.1
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 3.7e-19 100.1 84 61.9
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 9.4e-07 58.9 48 60.4
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 9.4e-07 58.9 48 60.4
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 9.4e-07 58.9 47 61.7


User provided reference genes

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