Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 2.5e-206 721.8 365 100.0
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.2e-78 297.7 373 49.9
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 5.7e-73 278.9 360 48.3
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 5.3e-71 272.3 364 46.4
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 3.2e-68 263.1 378 41.8
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 9.4e-68 261.5 383 42.3
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 6.1e-67 258.8 359 45.7
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.5e-65 254.2 369 42.5
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 2.6e-65 253.4 358 45.3
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 2.6e-65 253.4 373 42.9
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 3.3e-65 253.1 364 45.9
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 9.7e-65 251.5 370 44.3
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 2.8e-64 250.0 365 45.8
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 2.8e-64 250.0 365 45.5
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 2.8e-64 250.0 369 42.5
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 6.3e-64 248.8 369 44.4
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 6.3e-64 248.8 349 42.7
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 6.3e-64 248.8 361 44.3
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 8.2e-64 248.4 379 43.5
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 1.8e-63 247.3 359 44.0
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 5.3e-63 245.7 352 42.6
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.2e-62 244.6 357 41.5
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.6e-62 244.2 335 43.3
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 2.7e-62 243.4 381 39.9
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 7.7e-62 241.9 369 41.7
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.3e-61 241.1 361 43.2
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 1.7e-61 240.7 366 42.1
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 5.5e-60 235.7 390 40.0
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 5.5e-60 235.7 367 41.1
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.2e-59 234.6 361 42.4
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 1.2e-59 234.6 361 42.1
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 3.6e-59 233.0 362 41.2
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 1.0e-58 231.5 357 42.6
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.4e-58 231.1 344 42.4
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.5e-57 227.6 384 41.4
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 9.8e-57 224.9 347 42.7
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 9.8e-57 224.9 337 44.2
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 1.3e-56 224.6 375 40.5
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 2.8e-56 223.4 366 39.3
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 6.3e-56 222.2 352 38.4
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.1e-55 221.5 350 40.6
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 4.1e-55 219.5 350 41.4
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 7.0e-55 218.8 351 37.9
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 2.0e-54 217.2 357 39.5
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 3.5e-54 216.5 212 55.2
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.5e-54 216.1 224 54.9
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 1.3e-53 214.5 357 39.2
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 1.7e-53 214.2 352 37.2
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.2e-53 213.8 384 37.8
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 2.2e-53 213.8 349 36.7
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 2.9e-53 213.4 373 38.1
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 3.8e-53 213.0 360 37.5
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 6.5e-53 212.2 167 61.7
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 8.5e-53 211.8 357 37.0
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 8.5e-53 211.8 371 37.2
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 1.9e-52 210.7 360 39.2
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 5.5e-52 209.1 360 39.2
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.6e-51 207.6 266 44.7
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 1.6e-51 207.6 361 37.7
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 1.6e-51 207.6 362 37.6
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 2.1e-51 207.2 392 36.7
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 2.1e-51 207.2 339 39.5
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 2.7e-51 206.8 356 38.2
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.7e-51 206.8 171 60.2
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 2.7e-51 206.8 279 45.5
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 4.7e-51 206.1 375 35.2
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 6.1e-51 205.7 216 50.9
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 1.0e-50 204.9 211 48.8
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.8e-50 204.1 385 35.8
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 1.8e-50 204.1 222 49.1
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.0e-50 203.4 356 38.8
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 3.0e-50 203.4 374 38.0
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 4.0e-50 203.0 364 36.5
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 5.2e-50 202.6 191 57.1
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 8.8e-50 201.8 385 35.6
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.5e-49 201.1 211 49.8
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 5.7e-49 199.1 385 35.6
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 7.5e-49 198.7 390 35.4
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 3.7e-48 196.4 388 37.4
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 8.3e-48 195.3 398 35.2
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 1.8e-47 194.1 173 51.4
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 2.4e-47 193.7 393 33.3
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 7.0e-47 192.2 360 35.8
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.6e-46 191.0 354 39.0
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 2.7e-46 190.3 357 37.8
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 7.7e-46 188.7 250 41.6
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 1.7e-45 187.6 347 38.0
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 5.0e-45 186.0 167 53.9
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 6.6e-45 185.7 353 37.1
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 3.3e-44 183.3 168 54.2
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 1.6e-43 181.0 218 45.4
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 2.3e-42 177.2 399 34.3
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 3.0e-42 176.8 420 31.9
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 4.0e-42 176.4 235 41.7
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 6.4e-40 169.1 225 43.6
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 2.7e-38 163.7 153 56.2
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 5.6e-36 156.0 126 58.7
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 1.0e-34 151.8 120 64.2
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 3.1e-34 150.2 268 39.9
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 2.2e-32 144.1 173 41.0
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.7e-30 137.1 162 50.6
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 7.3e-28 129.0 262 34.4
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.4e-26 124.8 317 28.7
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 5.2e-26 122.9 333 27.3
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 3.2e-23 113.6 122 41.8
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 8.1e-19 99.0 91 50.5
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 8.9e-18 95.5 183 30.6
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 3.5e-14 83.6 245 29.8
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.9e-12 77.8 57 57.9


User provided reference genes

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