Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.8e-163 578.6 296 100.0
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.4e-82 309.7 274 59.1
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 4.2e-82 308.9 301 57.1
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 4.2e-82 308.9 221 66.1
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 4.6e-81 305.4 276 58.3
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 7.9e-81 304.7 259 60.2
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 1.3e-80 303.9 268 59.7
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 2.5e-79 299.7 294 56.1
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.3e-79 299.3 259 59.5
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 3.3e-79 299.3 217 67.7
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 3.3e-79 299.3 300 55.3
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 1.6e-78 297.0 276 57.6
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 2.1e-78 296.6 223 67.7
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.2e-78 295.0 273 57.1
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 1.4e-77 293.9 212 67.9
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 5.3e-77 292.0 270 55.6
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 5.3e-77 292.0 272 59.2
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 3.4e-76 289.3 274 57.3
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 3.4e-76 289.3 213 67.1
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 4.5e-76 288.9 262 59.5
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 9.9e-76 287.7 210 67.6
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 9.9e-76 287.7 218 65.6
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.3e-75 287.3 210 67.6
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 2.2e-75 286.6 217 64.1
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 2.9e-75 286.2 220 64.5
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 3.8e-75 285.8 210 67.1
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 3.8e-75 285.8 273 54.9
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 2.4e-74 283.1 218 64.2
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 2.4e-74 283.1 216 62.5
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 2.4e-74 283.1 261 55.9
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 4.2e-74 282.3 240 60.4
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.2e-73 280.8 275 57.1
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.1e-73 280.0 235 62.6
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 3.5e-73 279.3 244 59.0
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 6.0e-73 278.5 229 59.0
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 7.9e-73 278.1 240 57.5
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 1.0e-72 277.7 216 64.4
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 1.0e-72 277.7 275 55.6
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 1.8e-72 276.9 265 53.2
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 6.7e-72 275.0 267 52.8
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 6.7e-72 275.0 259 54.8
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 8.7e-72 274.6 207 64.3
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.1e-71 274.2 244 59.4
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.5e-71 273.9 207 64.3
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.5e-71 273.9 267 53.2
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 1.9e-71 273.5 219 59.4
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 1.9e-71 273.5 227 62.1
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 2.5e-71 273.1 211 64.9
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 5.6e-71 271.9 245 57.1
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 2.8e-70 269.6 270 53.0
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 2.8e-70 269.6 270 53.0
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 2.8e-70 269.6 253 56.9
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 2.8e-70 269.6 232 59.5
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 4.8e-70 268.9 297 51.9
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 4.8e-70 268.9 241 57.7
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 4.8e-70 268.9 220 60.9
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.1e-69 267.7 246 58.1
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 5.3e-69 265.4 271 53.1
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 6.9e-69 265.0 276 51.8
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 6.9e-69 265.0 220 61.8
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.2e-68 264.2 206 60.7
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 1.5e-68 263.8 206 60.2
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 4.5e-68 262.3 206 60.2
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 7.6e-68 261.5 215 62.8
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 7.6e-68 261.5 255 52.5
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 1.3e-67 260.8 275 52.0
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.3e-67 260.8 282 51.4
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 2.2e-67 260.0 284 50.4
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 4.9e-67 258.8 255 54.1
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 6.5e-67 258.5 293 50.2
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 8.4e-67 258.1 214 61.2
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 8.4e-67 258.1 239 57.7
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.1e-66 257.7 206 61.2
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 1.4e-66 257.3 266 52.3
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 1.2e-65 254.2 209 58.4
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.6e-65 253.8 276 52.5
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 3.5e-65 252.7 287 49.5
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 1.8e-64 250.4 268 50.7
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 6.7e-64 248.4 188 64.4
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 1.5e-63 247.3 219 57.1
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 2.5e-63 246.5 268 50.7
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 7.4e-63 245.0 200 58.0
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 3.7e-62 242.7 188 62.8
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 4.8e-62 242.3 179 67.6
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 6.9e-61 238.4 183 61.2
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 7.6e-60 235.0 178 65.2
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 7.6e-60 235.0 180 62.8
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.1e-57 226.9 184 58.2
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.1e-57 226.9 174 64.4
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.6e-57 225.7 278 50.0
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 1.3e-56 224.2 162 66.0
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 1.3e-56 224.2 224 50.0
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 6.7e-56 221.9 185 63.2
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.8e-53 213.8 288 44.8
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 6.9e-53 211.8 175 62.9
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 3.4e-52 209.5 211 54.0
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 5.7e-47 192.2 230 43.5
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 7.4e-47 191.8 204 51.5
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.4e-42 177.6 165 52.7
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 2.5e-42 176.8 234 43.2
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 1.2e-41 174.5 256 38.7
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 7.9e-41 171.8 257 42.0
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 5.2e-40 169.1 220 45.0
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 1.1e-39 167.9 124 66.1
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.0e-39 167.2 232 46.6
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.6e-39 166.8 134 64.9
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 4.4e-39 166.0 123 67.5
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 3.1e-37 159.8 200 49.5
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 5.9e-36 155.6 319 38.6
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 2.9e-35 153.3 94 74.5
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 5.0e-35 152.5 93 77.4
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 1.1e-34 151.4 93 77.4
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 2.1e-33 147.1 185 47.6
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 3.0e-32 143.3 247 38.5
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 6.7e-32 142.1 160 46.9
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.2e-31 141.4 220 39.5
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.5e-26 123.6 91 62.6
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.0e-25 118.6 176 45.5
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 3.0e-24 116.7 153 47.1
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 9.8e-23 111.7 98 58.2
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 1.4e-21 107.8 282 32.3
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 9.5e-18 95.1 60 70.0
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 1.2e-09 68.2 213 31.0
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 1.4e-08 64.7 41 68.3
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 5.2e-08 62.8 50 52.0


User provided reference genes

Program Settings