Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 3.7e-76 288.1 142 100.0
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 1.3e-20 103.6 135 45.9
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 2.0e-18 96.3 133 42.1
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 2.0e-18 96.3 137 43.8
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 3.5e-18 95.5 139 41.7
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 5.9e-18 94.7 141 40.4
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 1.7e-17 93.2 86 54.7
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 4.2e-16 88.6 91 53.8
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 4.2e-16 88.6 135 39.3
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 5.5e-16 88.2 151 42.4
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 7.2e-16 87.8 137 41.6
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 1.6e-15 86.7 86 48.8
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 2.8e-15 85.9 87 48.3
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 1.0e-14 84.0 134 38.1
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 4.0e-14 82.0 133 45.1
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 5.2e-14 81.6 89 49.4
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 6.8e-14 81.3 88 51.1
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 2.6e-13 79.3 77 55.8
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 7.5e-13 77.8 131 38.9
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 9.8e-13 77.4 87 42.5
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 9.8e-13 77.4 89 47.2
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 2.2e-12 76.3 84 45.2
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 2.8e-12 75.9 134 38.8
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 4.9e-12 75.1 140 36.4
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 4.9e-12 75.1 87 41.4
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 8.3e-12 74.3 113 40.7
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 1.4e-11 73.6 142 37.3
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 1.8e-11 73.2 140 37.1
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 1.8e-11 73.2 142 37.3
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 7.0e-11 71.2 148 35.1
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 2.3e-09 66.2 141 34.0
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 2.9e-09 65.9 81 51.9
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 3.8e-09 65.5 69 50.7
Dinv22752 Davidia involucrata HOM05D009134 ORTHO05D011284 1.9e-08 63.2 55 54.5
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 4.3e-08 62.0 99 43.4
AL4G42120 Arabidopsis lyrata HOM05D012296 ORTHO05D014409 4.0e-06 55.5 77 46.8
CARHR138460 Cardamine hirsuta HOM05D012296 ORTHO05D014409 4.0e-06 55.5 75 49.3
Thhalv10001781m.g Eutrema salsugineum HOM05D012296 ORTHO05D014409 8.9e-06 54.3 97 39.2


User provided reference genes

Program Settings